Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0310 |
Symbol | |
ID | 8131224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 362525 |
End bp | 363310 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863590 |
Product | hypothetical protein |
Protein accession | YP_003015905 |
Protein GI | 253686715 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA CTTCCCGGAT GCCTGCACTG TTCCTCGGCC ACGGTAGCCC GATGAACGTG TTGGAAAACA ATGTATATAC GCAGGCATGG CAAACGCTGG GTGAGACGCT GCCGCGTCCG AAAGCGATTA TTGCCGTTTC TGCCCACTGG TATACCCGTG GTACAGCTGT GACGGCGATG GAAAACCCAC GCACCATCCA TGATTTTGGC GGTTTCCCGC AGGCGCTGTT TGATACCCAG TATCCGGCAC CGGGTTCACC TGAATTGGCG GCGAGAATCC AGCAGGTGCT GGCGCCATAT CCCGTGACTG CCGATCAAAG CCAATGGGGT TTGGATCATG GTTCCTGGGG CGTGCTGATC AAGATGTATC CCGATGCGGA TATTCCCGTT GTGCAACTGA GCGTGGACGG CACACAGCCT GCTGCGTACC ACTACGAATT AGGGCGCAAG CTGGCGGCAC TGCGTGATGA AGGCTTCATG ATTGTCGCCA GTGGTAACGT CGTGCATAAC CTGCGGATGG TGAAATGGGA TGGTGATGCG GAGCCGTATC CGTGGGCAAT CTCGTTCAAT CAATTTGTGC GTGATAACCT GACGTATCAG GGGGACGACC ATCCGCTGGT TAATTTCATG CAGCATGAAG GTGCCGCATT ATCTAACCCG ACGCCCGATC ACTATTTCCC GCTGCTCTAT GTACTGGGAA GCTGGGATGG CAAAGAAGCG ATTAGTATTC CAGTCGATGG GCTCGAAATG GGCTCGCTGA GTATGCTGTC GGTGCAGGTG GGGTAA
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Protein sequence | MSNTSRMPAL FLGHGSPMNV LENNVYTQAW QTLGETLPRP KAIIAVSAHW YTRGTAVTAM ENPRTIHDFG GFPQALFDTQ YPAPGSPELA ARIQQVLAPY PVTADQSQWG LDHGSWGVLI KMYPDADIPV VQLSVDGTQP AAYHYELGRK LAALRDEGFM IVASGNVVHN LRMVKWDGDA EPYPWAISFN QFVRDNLTYQ GDDHPLVNFM QHEGAALSNP TPDHYFPLLY VLGSWDGKEA ISIPVDGLEM GSLSMLSVQV G
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