Gene PC1_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0295 
Symbol 
ID8131208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp340617 
End bp341120 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID644863575 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_003015890 
Protein GI253686700 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0748969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGT CTCAACTGTC TCCGCGTCGT CCGTATTTAT TACGGGCTTT TTATGATTGG 
TTGCTGGATA ACCAATTAAC GCCTCATCTG GTGGTAGATG TCACTCTGCC GGGTGTTATG 
GTGCCGATGG AGTTCGCCCG TGACGGCCAG ATCGTGCTGA ATATCGCACC GCGCGCTGTT 
GGCGGCCTTG AGTTAGCTGA TGACAGCGTT CGTTTCAATG CCCGTTTTGG CGGCGTACCG 
CGCCAGGTCT ACGTGCCGAT GGCGGCCGTA ATGGCGATTT ATGCGCGTGA GAACGGGGCT 
GGAACGATGT TTGAGCCTGA ACCTGCTTAC GAAGAATCCG CAGGCGAATT TGAAGACTTC 
CAGGAAGGCG CCCCTTCAGG GACAGTGATG TCGATTGTCG ATAGCTCGCC TGATTCTGAA 
GCCCCTGACG GTGGCTCTGG TTCTGATGAT GAACCGCCAC AGCCGCCTAA AGGTGGCAGA 
CCATCGCTGC GGGTGGTTAA ATAA
 
Protein sequence
MALSQLSPRR PYLLRAFYDW LLDNQLTPHL VVDVTLPGVM VPMEFARDGQ IVLNIAPRAV 
GGLELADDSV RFNARFGGVP RQVYVPMAAV MAIYARENGA GTMFEPEPAY EESAGEFEDF 
QEGAPSGTVM SIVDSSPDSE APDGGSGSDD EPPQPPKGGR PSLRVVK