Gene PC1_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0280 
Symbol 
ID8131193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp327593 
End bp328558 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content55% 
IMG OID644863560 
Productputative calcium/sodium:proton antiporter 
Protein accessionYP_003015875 
Protein GI253686685 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTG CAACACTACT CTTGTTCGTT GGTTTGCTAC TACTGGTCTA CGGTGCCGAC 
CGTCTTGTCT ATGGCGCTGC CGTGCTTGCG CGTTCCCTTG GCTTACCGCC TTTCGTCATC 
GGTATCACGA TTGTTGGCTT CGGCACCTCT CTACCCGAGC TGATCGTTTC CGTTACCGCC 
GCCTTGAACG ATCAGAACGA TATGGCCGTT GGTAATGTTA TCGGCTCTAA TATCGCCAAT 
ATCTTACTCA TTCTCGGCAG CGCAGCGCTC ATTCGGCCGC TGACAGTACA TTCAGCTATC 
CTGCGCCGAG AATTGCCGCT CATGTTGTCG GTCACTTTAT TGTGTGGCGT TTTGCTGCAT 
GATAGCTACC TGAGCCGCGC CGACGGCATG ATGCTGCTCT TTGCCGCCAT TCTCTGTCTG 
GTGTTGATAC TTCGCATGGC ACAACAGGCG CAGCGGGAAG GCGGCGATAG CCTAACCCGC 
GAACAGCTGG CGGAACTCCC ACAGGACGAC AGCAACCAGA TGGTCGCCGT ACTATGGCTG 
ATTCTTGGCA TGATTATTTT ACCCATGGCT GCCCGCATGG TGGTGGATAA CGCCACCGTC 
ATTGCACGCT ACTTCGATGT CAGCGAATTG ACCATTGGGC TGACGATATT GGCTATCGGC 
ACCAGCCTGC CCGAGCTTGC TACCGCCATC GTCGGGACGT TGAAGAAAGA AGATGATATT 
GCGCTGGGCA ACCTGATTGG CTCGAACATT TTTAATATCG CGATTGTGCT GGGCGTCCCC 
GCGCTGCTCT CGCCGGGCGC ACTGAACCCT CAGGTTTTTC AGCGCGACTA TTGGGTCATG 
CTGGCGGCGA GCGTGCTGTT GACCGCACTG TGCCTCAGCA AAAAACGCCG TATCGGACAG 
GGCGCGGGCG CATTGTTATG CTGCGCGTTT ATCGCCTACC TGACGGTGTT GTTCTGTTTT 
TCATAA
 
Protein sequence
MLFATLLLFV GLLLLVYGAD RLVYGAAVLA RSLGLPPFVI GITIVGFGTS LPELIVSVTA 
ALNDQNDMAV GNVIGSNIAN ILLILGSAAL IRPLTVHSAI LRRELPLMLS VTLLCGVLLH 
DSYLSRADGM MLLFAAILCL VLILRMAQQA QREGGDSLTR EQLAELPQDD SNQMVAVLWL 
ILGMIILPMA ARMVVDNATV IARYFDVSEL TIGLTILAIG TSLPELATAI VGTLKKEDDI 
ALGNLIGSNI FNIAIVLGVP ALLSPGALNP QVFQRDYWVM LAASVLLTAL CLSKKRRIGQ 
GAGALLCCAF IAYLTVLFCF S