| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0278 |
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| Symbol | |
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| ID | 8131191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 325876 |
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| End bp | 326442 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863558 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_003015873 |
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| Protein GI | 253686683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.308436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAG TCAGGGCGCA AACCGATACC TGCTATGGGC CTGTCGATCA ACAGGTACTG
GATAAAGCCC GTGAAGTTCG CCTGTTAATC TGCGACGTTG ACGGCGTGAT GTCCGATGGT
CTGATTTATA TGGGCAACCA CGGCGAAGAG CTGAAAGCCT TTAACGTCCG CGACGGCTAT
GGCATTCGCT GCTTGCTGAC ATCTGGCATT GAGGTTGCCA TCATCACCGG ACGCTCGGCA
AAACTGCTGG AAGATCGGTG TAAAACACTG GGCATTAACC ATCTTTATCA GGGGCAATCG
GATAAGGTTT TGGCCTTCAA CGATCTGTTG GATAAACTAT CAGTAACGGC AAATCAGGTC
GCGTATATCG GCGACGATAT GATCGACTGG CCGGTGATGG CACAGGTCGG GTTGAGCGTC
GCCGTGGCTG ACGCCCACCC GCTATTGTTA CCACGCGCAG ATTATGTCAC CCGCATTGCG
GGAGGGCGTG GCGCAGTACG TGAGCTGTGT GATTTGATTC TGTTCTCGCA GGACAAGCTG
GAGCATGCCA AAGGGTTGTC AATATGA
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| Protein sequence | MSEVRAQTDT CYGPVDQQVL DKAREVRLLI CDVDGVMSDG LIYMGNHGEE LKAFNVRDGY
GIRCLLTSGI EVAIITGRSA KLLEDRCKTL GINHLYQGQS DKVLAFNDLL DKLSVTANQV
AYIGDDMIDW PVMAQVGLSV AVADAHPLLL PRADYVTRIA GGRGAVRELC DLILFSQDKL
EHAKGLSI
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