Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0273 |
Symbol | |
ID | 8131186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 322237 |
End bp | 322524 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644863553 |
Product | putative sigma(54) modulation protein |
Protein accession | YP_003015868 |
Protein GI | 253686678 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.461096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTCA ACATTACCGG ACACCACATC GAGATCACTG AACCGCTGCG TGATTTTGTG AATGGCAAGT TTGCCAAATT AGAGCAGTAT TTTGACCGGA TTAATCAGGT CAATGTGGTA TTGAGAGTGG AAAAAGTTCA GCAAATTGCC GAGGCCACGA TCCACGTTAA TGGCGGCGAG CTGCATGCGA CCTCAGAAGC GGAAGATATG TACGCCGCGA TAGATTTATT GATTGATAAG CTGGCGAGAC AGCTCAATAA GCATAAAGAT AAACTCAAGC AGCACTAA
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Protein sequence | MQLNITGHHI EITEPLRDFV NGKFAKLEQY FDRINQVNVV LRVEKVQQIA EATIHVNGGE LHATSEAEDM YAAIDLLIDK LARQLNKHKD KLKQH
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