Gene PC1_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0273 
Symbol 
ID8131186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp322237 
End bp322524 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content45% 
IMG OID644863553 
Productputative sigma(54) modulation protein 
Protein accessionYP_003015868 
Protein GI253686678 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.461096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA ACATTACCGG ACACCACATC GAGATCACTG AACCGCTGCG TGATTTTGTG 
AATGGCAAGT TTGCCAAATT AGAGCAGTAT TTTGACCGGA TTAATCAGGT CAATGTGGTA
TTGAGAGTGG AAAAAGTTCA GCAAATTGCC GAGGCCACGA TCCACGTTAA TGGCGGCGAG
CTGCATGCGA CCTCAGAAGC GGAAGATATG TACGCCGCGA TAGATTTATT GATTGATAAG
CTGGCGAGAC AGCTCAATAA GCATAAAGAT AAACTCAAGC AGCACTAA
 
Protein sequence
MQLNITGHHI EITEPLRDFV NGKFAKLEQY FDRINQVNVV LRVEKVQQIA EATIHVNGGE 
LHATSEAEDM YAAIDLLIDK LARQLNKHKD KLKQH