Gene PC1_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0270 
Symbol 
ID8131183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp320345 
End bp320617 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content59% 
IMG OID644863550 
Productphosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 
Protein accessionYP_003015865 
Protein GI253686675 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTCC GGCAAACGGT TGAAATCAAA AACAAGCTGG GCATGCACGC TCGCCCAGCC 
ATGAAGCTGT TCGAGCTGGT GCAGAGCTTC GATGCAGAAG TGATACTGCG CAATGACAGC
GGCACCGAAG CCGAAGCCAG CAGCGTGATT GCCATGCTGA TGCTGGACTC CGCCAAAGGG
CGGCTCATCG AGGTGGAAGC CACTGGCCCG GATGAAGCAC AGGCGCTTGC CGCCGTCATC
GGGCTGTTCG AAGCCGGGTT CGACGAAGAC TAG
 
Protein sequence
MTVRQTVEIK NKLGMHARPA MKLFELVQSF DAEVILRNDS GTEAEASSVI AMLMLDSAKG 
RLIEVEATGP DEAQALAAVI GLFEAGFDED