| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0265 |
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| Symbol | |
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| ID | 8131178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 312266 |
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| End bp | 313720 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863545 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003015860 |
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| Protein GI | 253686670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGAC AAAATTTGCA GGATCATGAA CTGTTCAAAA CGGGCTACTT TGCGGCGGGA
AAATGGCAGC AAGGCACAGC CACCTTCGAG GTAGTGAATC CGGCGACGGG TGAGACTATT
GCCAGCGTAG CAAAAGCGGG GAAGAAAGAG ACGCAGGCGG CGATTGACGC TGCCTATGCC
GCCTTTCCCG CCTGGAAACG TAAAACCGCG AAGGAACGCT CTGAAATTCT GTATCGCTGG
TACGAGCTGA TTCTGGAGAA TAAGCGCTAT CTGGCGGAGC TGATGACTGC CGAACAGGGC
AAGCCAGTGC AGGAGGCAGA AGGTGAGGTT GTCTATGCGG CGAGTTTCAT TCAGTGGTTT
GCTGAGCAGG GCAAGCGGGC TAACGGTGAG ATTATTCCAT CTGCGAAACC CGGATCGAAG
ATTTATGCCA CGCGTGAACC CGTTGGCGTC GTTGTTGCCA TTACACCGTG GAATTTCCCG
CTGGCGATGC TGACACGTAA GCTGGGGCCA GCGCTGGCCG CAGGGTGTAC TGGCGTCATC
AAACCCGCGA ACAACACGCC GCTGTCTGCG TTTGCGCTGC TGGCACTGGC GCAGCAGGCA
GGTGTGCCGG ATGGAGTACT TAACGGCGTG GCGGGCGATA CGCAGGCGAT CAGCGATACC
GTCATGGCAA GCGATAAAGT GCGCAAAATT TCTTTCACCG GCTCAACGAC GGTAGGGAAA
ACGCTGGTGC GTAACGCGGC TGACACTATG AAGAAAGTGT CGATGGAACT GGGTGGGAAC
GCACCTTATA TCGTGTTTGA CGATGCGGAT ATTCAGGCTG CAGTAAAAGG TGCGATTGCT
AACCGTTTCC GTAACGCAGG TCAGGTTTGC GTCAGTGCCA ATCGGTTTTA TATTCAGGAT
GGTGTCTACG ATGAGTTTGT CTCTCTGCTC GCGGAAGAAG TGAAAAGGCT TAAAGTCGGT
AACGGCATGG ATGACGGCGT TGTACTGGGT CCGCTAATTG ATGATGCGGC TGTCGAGAAG
GTAGAGAAGC ACGTCAATGA TGCGGTGGAA AAAGGCGGTA AGGCACTGGT CGGTGGTCAA
CGGCACAAGC TGGGTCACAG CTTCTTTGAG CCGACGGTGA TTGTTGATGC CAATGAAGCG
ATGTTGCTTG CGCAGGAAGA AACGTTTGGT CCGGTCGCTC CGTGTTTCCG CTTCAAAACG
GAAGAAGAGG TGATTGAGCG TGCGAATAAT ACGCCATTTG GCTTGGCAGC CTACTTCTAC
AGCCAGAATT TGCAGCGTGT GTTCCGCGTG GCAGAAGCAC TTGAGAGCGG CATGGTGGGT
ATTAACGAAT GCGCGGTTTC AACCGAACTG GCGCCATTTG GCGGTGTGAA AGAGTCAGGA
TTAGGTCGCG AAGGATCGGT TCTGGGACTG GATGAGTTTC TGGAAGTAAA AACCTGGCAT
CTGGGCGGAT TGTAA
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| Protein sequence | MSGQNLQDHE LFKTGYFAAG KWQQGTATFE VVNPATGETI ASVAKAGKKE TQAAIDAAYA
AFPAWKRKTA KERSEILYRW YELILENKRY LAELMTAEQG KPVQEAEGEV VYAASFIQWF
AEQGKRANGE IIPSAKPGSK IYATREPVGV VVAITPWNFP LAMLTRKLGP ALAAGCTGVI
KPANNTPLSA FALLALAQQA GVPDGVLNGV AGDTQAISDT VMASDKVRKI SFTGSTTVGK
TLVRNAADTM KKVSMELGGN APYIVFDDAD IQAAVKGAIA NRFRNAGQVC VSANRFYIQD
GVYDEFVSLL AEEVKRLKVG NGMDDGVVLG PLIDDAAVEK VEKHVNDAVE KGGKALVGGQ
RHKLGHSFFE PTVIVDANEA MLLAQEETFG PVAPCFRFKT EEEVIERANN TPFGLAAYFY
SQNLQRVFRV AEALESGMVG INECAVSTEL APFGGVKESG LGREGSVLGL DEFLEVKTWH
LGGL
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