| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0263 |
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| Symbol | |
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| ID | 8131176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 309161 |
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| End bp | 310126 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863543 |
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| Product | p-hydroxybenzoic acid efflux subunit AaeA |
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| Protein accession | YP_003015858 |
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| Protein GI | 253686668 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGCTT TCTTTTTAAC CTTATTTAGG CAGCAGGCCG TGCTGATCAA AAAAATGAGC
CGCGTAGCGA TTACGCTGGT GATTGTGCTG TGTGCGATTG TCGCCATTTT CCGTGTCTGG
GCGTTTTATA CCGAATCGCC CTGGACGCGC GATGCCAAAT TTACGGCGGA TGTTGTCGCG
ATTGCACCGG ACGTCAGTGG GTTGTTGAGC GATGTTCGCG TCACGGACAA TCAACTGGTG
AACAAAGGGG ATGTGCTGTT TGTTATCGAT CAGCCGCGCT ACCATCAGGC TGTCGCGCAG
GCGGAAGCGG ATGTCGCCTA CTATCAGGCG CTGGTAACGG AAAAACGCCG GGAATCAGGG
CGTCGGGCGC GACTGGGCAT CAGTGCGATG TCGCAGGAAA ATATCGATCA GTCCAGTAAT
GCCCTGGAAA CCGCCACGCA CCAGCTTGCT AAAGCGCAGG TGGTATTGTC ACTGGCGCAA
CTGGAGCTGG AACGCACCGT GGTACGCGCT CCTGCTGACG GTTGGGTGAC CAACCTGCAT
GTGCAGAGCG GTGAGTTCAT CGAACGCGGC AATACGGCGG TAGCGCTGGT GAAGAAGGAT
TCGTTCTACC TGCTGGCGTA CATGGAAGAA ACCAAGCTTG AAGGGGTTCG CCGCGGCTAT
CGTGCAGAAA TCACGCCGTT GGGCAGTGAA AAGATATTTT ATGGCACGGT GGATAGCGTA
GCGGCTGGCG TGAATAACAG CAGCAGCAGC GCGAACAATA AAGGCCTGGC TAACGTGGAT
TCTAATCTGG AGTGGGTACG TCTGGCGCAG CGTGTGCCGG TAAAAATTCG CCTCGATCGC
CAAATGGGCG ACCTCTATCC AGCTGGCACG ACGGCAACGG TAGTGATCAC GGGTGAACAG
GTCAACAATG ACAAAAAACC GTCGCCGCTT ATTCGTCTCC TGTATCGCCT GCGTGAGTTT
GGTTAA
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| Protein sequence | MKAFFLTLFR QQAVLIKKMS RVAITLVIVL CAIVAIFRVW AFYTESPWTR DAKFTADVVA
IAPDVSGLLS DVRVTDNQLV NKGDVLFVID QPRYHQAVAQ AEADVAYYQA LVTEKRRESG
RRARLGISAM SQENIDQSSN ALETATHQLA KAQVVLSLAQ LELERTVVRA PADGWVTNLH
VQSGEFIERG NTAVALVKKD SFYLLAYMEE TKLEGVRRGY RAEITPLGSE KIFYGTVDSV
AAGVNNSSSS ANNKGLANVD SNLEWVRLAQ RVPVKIRLDR QMGDLYPAGT TATVVITGEQ
VNNDKKPSPL IRLLYRLREF G
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