Gene PC1_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0246 
Symbol 
ID8131159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp290811 
End bp291410 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID644863527 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_003015842 
Protein GI253686652 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.398853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGA CGCTACAACA CATTACCCGG TTAAAAGTGC TACTCCATCT GGCTGGTTTT 
CTGCCGCTGC TGTGGCTGAT ATTGTCGGTT GACCAAGGGT GGTTCAGCGC CGATCCGGCC 
AAGGATATCC AGCACTTTAC CGGCAGAATG GCGCTGAAAT TGCTGCTGGC GACGCTGCTA 
GTCACGCCAC TGGCGCGCTA CGGCAAACAG CCGCTGCTCA TTCGCTGCCG TCGGCTCCTC 
GGGCTGTGGT GTTTTTTCTG GGCAACGTTA CACCTGGTGA GTTACGCGCT GCTGGAACTG 
GGTCTGGATC ATCTGGCGCT GTTGGGTAAG GAGCTGATAT CCCGTCCCTA TTTGACGCTG 
GGTGTCATAA GCTGGCTGAT TTTGCTGGCG CTGGCAGTGA CCTCGCCACA GATAATGATG 
CGCAAGTTGG GATCGCAATG GCAAAAACTG CATAATTTTG TCTATTTAGT CGCCATTCTT 
GCGCCTATCC ACTATCTTTG GTCAGTTAAA ACGCTGTCTC CACAGCCCAT TTTGTATGCG 
CTGGCGGCAC TGATATTGCT GCTGTTCCGT TATAAGAAAT TTCGCCAATG GTGGCGCTAA
 
Protein sequence
MRLTLQHITR LKVLLHLAGF LPLLWLILSV DQGWFSADPA KDIQHFTGRM ALKLLLATLL 
VTPLARYGKQ PLLIRCRRLL GLWCFFWATL HLVSYALLEL GLDHLALLGK ELISRPYLTL 
GVISWLILLA LAVTSPQIMM RKLGSQWQKL HNFVYLVAIL APIHYLWSVK TLSPQPILYA 
LAALILLLFR YKKFRQWWR