| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0238 |
|---|
| Symbol | |
|---|
| ID | 8131151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 283513 |
|---|
| End bp | 284247 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644863519 |
|---|
| Product | Carbonate dehydratase |
|---|
| Protein accession | YP_003015834 |
|---|
| Protein GI | 253686644 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3338] Carbonic anhydrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTA AACTCTCTAT CGTATTGATG CTGTCAGCCT GCTTTCCCGT ATTGGCGGCC
GATCCGGTAA ACTGGGGCTA CGAAGGCAAC GGCGATCCGG CGCATTGGGG AAAGCTGTCC
CCAGACTTCT CGCTGTGTGA AACCGGTAAA AACCAATCTC CCATTAATAT CCGCCAGGCA
CTGAACGCCC AGCACGACCC TTTACAGCTA GCCTTCCTGC CAGGGACACA GCAAATCATC
AACAATGGGC ATACCGTTCA GGTTAACGTC GGTCCGGGGA ATACACTGCT GTTGGATAAC
GAGACATTCA CCTTGCAGCA GTTTCACTTC CACGCACCGA GCGAGAATGA AATTGACGGT
AAACAGTTTC CGCTGGAAGG CCATTTTGTC TATAAAGACG CAAGCGGCGC GCTTACCGTT
ATCGCGCTGA TGTTTCAGGA GGGAGAAGCC AATCAGCCGT TAGCCACGGC ATGGCAGCAG
ATTCCAGCTC AGGTTAATCA GGCGGAGGAG GTGCGCACGC CAATCGCGAT TCAGAGCCTG
TTACCGACGT CATTAAACTA CTATCGGTTT AGTGGGTCGC TCACCACGCC GCCATGCTCA
GAGGGCATTC GCTGGCTGGT GCTGGATCAC CCCGTCACCG CTTCTGCTGA ACAAATCAAC
CAGTTCCGCT CGGTCATGCA TCACGCGAAT AATCGCCCCA TACAGCCGCT TAATGGCCGC
GTCATCATCC ACTAA
|
|---|
| Protein sequence | MKGKLSIVLM LSACFPVLAA DPVNWGYEGN GDPAHWGKLS PDFSLCETGK NQSPINIRQA
LNAQHDPLQL AFLPGTQQII NNGHTVQVNV GPGNTLLLDN ETFTLQQFHF HAPSENEIDG
KQFPLEGHFV YKDASGALTV IALMFQEGEA NQPLATAWQQ IPAQVNQAEE VRTPIAIQSL
LPTSLNYYRF SGSLTTPPCS EGIRWLVLDH PVTASAEQIN QFRSVMHHAN NRPIQPLNGR
VIIH
|
|---|
| |