Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0235 |
Symbol | |
ID | 8131148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 280852 |
End bp | 281628 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644863516 |
Product | hypothetical protein |
Protein accession | YP_003015831 |
Protein GI | 253686641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTCA CTGAACGTCA TCATCAAAGC CCCCCCTTAC TCATCGCCAA TGTCTGGGAT GCGAGCAGTG CTATTGCCGC TCAGCATGCA GGCTATCAAG CCCTGGGAAC CTCAAGCGCA GCCATTGCCG CTATGTTAGG TTACGAGGAC GGAGAAGCGA TGTCATTTGA TGAATTGCTA TACATCGTCA CGCGTATCAA ATCCGTCAGT CACCTACCAT TAAGCGTTGA TGTTGAAGCA GGGTTTGGTA GAACAGCAAG TGAGATCACC GTTAATCTTA AGCGTCTCGC CTCACTCGGC GTGGTTGGTG TAAACCTTGA GGATAGCAGA GTGGTTAATG GTGTCAGACA ACTTGATGAT GCCGTAGCAT TTAGCAGAAC GTTAAAAGAG ATTCGTCATG CGTTGACCAT AGAGAATGAC CAATTGTTCT TTAATATTCG TACTGATACT TTTCTTCTTG GTCATGAGCA GGCACTACAG GAAACACTAT TACGCGGTCG CTTATATGAA GAGGCTGGTG CAGACGGCCT TTTTGTTCCA TGCCTAACAT CTGAAAATGA TATTGCGATC ATTTCTCGGG AGATTAATTT GCCACTCAAC GTCATGTGCA TGCCAGACCT CCCGGCTTTC GACAGGCTGA AGACGCTCGG TGTCAATCGC CTCTCTATGG GTAATTTTGT TCATTCCGCC ATTCAATCAA CCTTTAAAAA CATAATGCTC ACTATCCAGT CGCAACAGTC ATTTGCAGGA GTATTTGTTG ATGAAAGTTC TCGATAA
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Protein sequence | MNFTERHHQS PPLLIANVWD ASSAIAAQHA GYQALGTSSA AIAAMLGYED GEAMSFDELL YIVTRIKSVS HLPLSVDVEA GFGRTASEIT VNLKRLASLG VVGVNLEDSR VVNGVRQLDD AVAFSRTLKE IRHALTIEND QLFFNIRTDT FLLGHEQALQ ETLLRGRLYE EAGADGLFVP CLTSENDIAI ISREINLPLN VMCMPDLPAF DRLKTLGVNR LSMGNFVHSA IQSTFKNIML TIQSQQSFAG VFVDESSR
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