Gene PC1_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0235 
Symbol 
ID8131148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp280852 
End bp281628 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content46% 
IMG OID644863516 
Producthypothetical protein 
Protein accessionYP_003015831 
Protein GI253686641 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCA CTGAACGTCA TCATCAAAGC CCCCCCTTAC TCATCGCCAA TGTCTGGGAT 
GCGAGCAGTG CTATTGCCGC TCAGCATGCA GGCTATCAAG CCCTGGGAAC CTCAAGCGCA
GCCATTGCCG CTATGTTAGG TTACGAGGAC GGAGAAGCGA TGTCATTTGA TGAATTGCTA
TACATCGTCA CGCGTATCAA ATCCGTCAGT CACCTACCAT TAAGCGTTGA TGTTGAAGCA
GGGTTTGGTA GAACAGCAAG TGAGATCACC GTTAATCTTA AGCGTCTCGC CTCACTCGGC
GTGGTTGGTG TAAACCTTGA GGATAGCAGA GTGGTTAATG GTGTCAGACA ACTTGATGAT
GCCGTAGCAT TTAGCAGAAC GTTAAAAGAG ATTCGTCATG CGTTGACCAT AGAGAATGAC
CAATTGTTCT TTAATATTCG TACTGATACT TTTCTTCTTG GTCATGAGCA GGCACTACAG
GAAACACTAT TACGCGGTCG CTTATATGAA GAGGCTGGTG CAGACGGCCT TTTTGTTCCA
TGCCTAACAT CTGAAAATGA TATTGCGATC ATTTCTCGGG AGATTAATTT GCCACTCAAC
GTCATGTGCA TGCCAGACCT CCCGGCTTTC GACAGGCTGA AGACGCTCGG TGTCAATCGC
CTCTCTATGG GTAATTTTGT TCATTCCGCC ATTCAATCAA CCTTTAAAAA CATAATGCTC
ACTATCCAGT CGCAACAGTC ATTTGCAGGA GTATTTGTTG ATGAAAGTTC TCGATAA
 
Protein sequence
MNFTERHHQS PPLLIANVWD ASSAIAAQHA GYQALGTSSA AIAAMLGYED GEAMSFDELL 
YIVTRIKSVS HLPLSVDVEA GFGRTASEIT VNLKRLASLG VVGVNLEDSR VVNGVRQLDD
AVAFSRTLKE IRHALTIEND QLFFNIRTDT FLLGHEQALQ ETLLRGRLYE EAGADGLFVP
CLTSENDIAI ISREINLPLN VMCMPDLPAF DRLKTLGVNR LSMGNFVHSA IQSTFKNIML
TIQSQQSFAG VFVDESSR