| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0219 |
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| Symbol | hemE |
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| ID | 8131127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 259191 |
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| End bp | 260255 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863495 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003015815 |
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| Protein GI | 253686625 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TGAAAAACGA TCGCTACTTG CGGGCGTTAT TGCGCCAACC CGTTGATGTC
ACCCCAGTAT GGATGATGCG TCAGGCGGGG CGTTATTTGC CGGAATATAA GGCAACGCGC
GCGCAGGCGG GTGATTTTAT GTCACTGTGT AAAAACGCAG AACTGGCTTG CGAAGTCACG
TTACAACCTT TACGACGTTA TGCGCTGGAT GCGGCGATCC TGTTCTCCGA TATCCTGACT
ATTCCTGACG CCATGGGCTT AGGGCTCTAT TTTGAAGCAG GGGAAGGCCC ACGCTTTCAC
TCTCCCATCA CGTCTCATGC CGATGTAGTT AACCTGCCGA TTCCCGATCC TGAGCAGGAA
CTCGGTTATG TGATGAACGC AGTGCGGACG ATCCGGAAAA ATCTCGCCGG TGAAGTGCCG
TTGATCGGTT TCTCGGGCAG CCCGTGGACG CTGGCGACCT ATATGGTTGA AGGCGGTAGC
AGCAAAGCGT TTACCGTCAT CAAGAAAATG ATGTTCGCTG AGCCTAAAAC GTTACACCTG
CTGCTGGATA AGCTGGCTGA TAGCGTCATT CTTTATCTCA ACGCGCAAAT TCGCGCTGGC
GCGCAGGCGG TCATGGTATT CGATACCTGG GGCGGCGCGC TGAGCGGACG TGACTACAAA
GAATTCTCCC TGCGGTACAT GCATAAGATT GTTGATGGTT TACAACGTGA GAACGAAGGT
CGCCGAGTGC CTGTGACGCT CTTTACCAAA GGCGGAGGCC AGTGGCTGGA GGCGATGGCA
GAAACTGGCT GTGACGCGCT GGGGCTGGAC TGGACGAGCG ATATTGCCGA CGCACGCCGT
CGGGTCGGCG ATAAAGTGGC GCTACAGGGT AATATGGATC CGTCGATGTT GTATGCCGAT
CCTGCACGGA TCGAACAGGA AGTGGCATCG ATCCTCGCTG GATTTGGGCA AGGTAACGGA
CATGTTTTCA ATCTGGGTCA CGGCATTCAT CAGGACGTGC CGCCGGAGCA TGCGGGCGTG
TTTGTTGAGG CTGTGCATCG GTTGTCCCGC CCTTATCACG CATGA
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| Protein sequence | MTDLKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT
LQPLRRYALD AAILFSDILT IPDAMGLGLY FEAGEGPRFH SPITSHADVV NLPIPDPEQE
LGYVMNAVRT IRKNLAGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MFAEPKTLHL
LLDKLADSVI LYLNAQIRAG AQAVMVFDTW GGALSGRDYK EFSLRYMHKI VDGLQRENEG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTSDIADARR RVGDKVALQG NMDPSMLYAD
PARIEQEVAS ILAGFGQGNG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSR PYHA
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