Gene PC1_0211 details

Gene Information

• Locus tag: PC1_0211
• Symbol: thiH
• ID: 8131119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 251815
• End bp: 252936
• Gene Length: 1122 bp
• Protein Length: 373 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644863487
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_003015807
• Protein GI: 253686617
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTCG ATTTTCAAAC CGTCTGGGAA CAGCTCGACT GGGATGACCT GACGCTACGC 
ATCAACGGCA AAACCGCACA GGATGTTGAA CGGGCGCTCA CTGCACCACA CCTGACGCAT 
GACGATTTTA TGGCGCTCAT TTCACCTGCC GCCAGCGCCT ATCTGGAACC GCTTGCCCAG 
CGGGCGCAGC AGCTCACCCG CCAGCGTTTC GGCAATACGG TGAGTTTCTA TGTCCCGCTG 
TATTTGTCCA ATCTGTGCTC TAACGACTGT ACCTACTGCG GCTTTTCGAT GAGCAACCAC 
ATCAAGCGTA AAACGCTGGA TGAGGCAGAG ATCTTGCGTG AATGCGCCGC TATCAAAGAA 
CTCGGATTTG AGCACCTGCT GCTCGTCACG GGTGAACACC AGCGTAAAGT GGGGATGGAC 
TATTTTCGGC GCGTTTTTCC ACTTATCCGG CCGCTTTTCA GTTCCCTGAT GATCGAAGTT 
CAGCCGTTGT CGCAGGACGA GTACGCCGAA TTAAAAGCAC TGGGGCTGGA TGGTGTGATG 
GTCTATCAGG AAACCTATCA TACGGCAACC TACCAACTGC ATCATCTAAA AGGACAAAAG 
CAGGATTTCC ACTGGCGGCT TGCCACACCG GATCGGCTTG GCCGTGCCGG GATCGATAAG 
ATCGGGCTAG GTGCCTTAAT CGGCCTGTCC AATAGCTGGC GTACCGACTG CTACATGGTG 
GCAGAGCACC TGTTGCACTT GCAGCAGCAC TACTGGCAGA GCCGGTATTC TATCTCGTTC 
CCTCGCCTGC GCCCCTGTGC GGGCGGCATT GAACCGGCGT CGTTAATGGA TGAAGCACAG 
CTGATGCAGG TGATTTGCGC ATTCCGCTTG CTGGCGCCGG ATATTGAATT GTCGCTGTCC 
ACACGTGAAT CACCGTTCTT TCGCGATCAT GCGATCCCTA TCGCGATTAA CAACGTCAGC 
GCCTTCTCCA AAACCCAACC GGGTGGCTAC GCCGATGACC ATCCTGAACT GGAACAATTT 
TCTCCCCACG ATTCACGGCG TCCTGAAGAC GTAGCGCAGG CCATCGTGCG TGCAGGTCTT 
CAGCCAGTAT GGAAAGACTG GGACGGCTAT TTGGGCAGAT AA 

 

Protein sequence

MSVDFQTVWE QLDWDDLTLR INGKTAQDVE RALTAPHLTH DDFMALISPA ASAYLEPLAQ 
RAQQLTRQRF GNTVSFYVPL YLSNLCSNDC TYCGFSMSNH IKRKTLDEAE ILRECAAIKE 
LGFEHLLLVT GEHQRKVGMD YFRRVFPLIR PLFSSLMIEV QPLSQDEYAE LKALGLDGVM 
VYQETYHTAT YQLHHLKGQK QDFHWRLATP DRLGRAGIDK IGLGALIGLS NSWRTDCYMV 
AEHLLHLQQH YWQSRYSISF PRLRPCAGGI EPASLMDEAQ LMQVICAFRL LAPDIELSLS 
TRESPFFRDH AIPIAINNVS AFSKTQPGGY ADDHPELEQF SPHDSRRPED VAQAIVRAGL 
QPVWKDWDGY LGR