| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0199 |
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| Symbol | secE |
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| ID | 8131107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 235650 |
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| End bp | 236033 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863475 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_003015795 |
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| Protein GI | 253686605 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00725856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGCGA ATACCGAAGC TCAGGATAGT GGGCGTGGCC TGGAAGTGAT TAAGTGGCTG
GTAGTAGGTG CCTTGCTGGT TGTTGCGATT GTTGGCAATT ATTATTACCG CGAATTTAGT
CTTCCCCTGC GTGCATTGGC CGTTGTTATC CTGATCGCCG CAGCCGGTGG TGTGGCACTG
CTGACCACGA AAGGCAAAGC AACCGTAGCG TTTGCTCGCG AAGCGCGCAC TGAAGTGCGC
AAAGTAATTT GGCCGACTCG TCAGGAAACG TTACACACCA CGTTAATCGT TGCCGCGGTG
ACTGCCGTGA TGTCACTGAT TTTGTGGGGA CTGGATGGTA TTCTGGTCCG TTTGGTATCG
TTTATCACTG GCCTGAGGTT CTAA
|
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| Protein sequence | MSANTEAQDS GRGLEVIKWL VVGALLVVAI VGNYYYREFS LPLRALAVVI LIAAAGGVAL
LTTKGKATVA FAREARTEVR KVIWPTRQET LHTTLIVAAV TAVMSLILWG LDGILVRLVS
FITGLRF
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