Gene PC1_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0195 
Symbol 
ID8131099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp230613 
End bp231572 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content44% 
IMG OID644863467 
Productbiotin--protein ligase 
Protein accessionYP_003015791 
Protein GI253686601 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000104624 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA CTACGGTTCC TCTTAAACTA ATTAAAATCC TCTCTGATGG CGAATTTTAT 
TCCGGTGAAT TACTGGGTGA AATGATGGGG ATGAGTCGAG CGGCGATTAA TAAACATATC 
CAAACTATAC GTGATTGGGG AATAGATGTT TTTACTGTAA CGGGTAAGGG CTATTCATTA 
CCAGCACCTA TGCAGTTATT GGACGAAGAG GTTATTCTTA AGCACCTACC GGAAGGTGGA 
GTGACAGTCT TACCTGTCGT TGATTCTACT AATCAGTATA TTTTAGATCG ATTGGACATC 
TTATCCTCCG GTGATGCATG CCTTGCTGAA TATCAGCAAT CTGGGCGTGG CCGTCGAGGT 
CGGCAATGGT TTTCGCCTTT TGGGGCGAAT TTATATTTAT CCTTATATTG GCGTCTAGAA 
CAGGGGCCAG CCGCGGCTGT TGGTGTTAGC CTGGTTATCG GTATCGTAAT GGCAGAAGTG 
CTTCACAAGC TTGGTGCTGA TGGTGTCCGA GTCAAATGGC CCAATGATTT ATATCTGAAG 
GATAGAAAAT TAGCAGGTAT TCTTGTCGAG CTTACCGGAA AAACAGGGGA TGCGGCTAAC 
CTGGTCATTG GCGCGGGCAT TAATCTACAG ATGAGAGAGC CTGCTCCAGA TACGATTAGT 
CAAGGTTGGA TAAATTTACA AGAAGCAGGT ATAGATATTA ATCGCAATAC ACTCGCTTCG 
ACTCTTATTT CTGAATTAAG AGGGGCTCTG GCTATCTTTG AACTACAAGG CCTTGAGCCA 
TTTATTCCCA GATGGGAAAA ATTGGATAAC TATTTTAATC GCCCGGTTCG TTTGATTATC 
GGTAATCGTG AAATATATGG AATCGACCGA GGAATAGATC GTCAAGGGGC GCTGCTCTTA 
GAAAACGATG GGTTGGTCAC GCCATATATT GGTGGGGAGA TTTCTCTGCG TGGTGCGTGA
 
Protein sequence
MKDTTVPLKL IKILSDGEFY SGELLGEMMG MSRAAINKHI QTIRDWGIDV FTVTGKGYSL 
PAPMQLLDEE VILKHLPEGG VTVLPVVDST NQYILDRLDI LSSGDACLAE YQQSGRGRRG 
RQWFSPFGAN LYLSLYWRLE QGPAAAVGVS LVIGIVMAEV LHKLGADGVR VKWPNDLYLK 
DRKLAGILVE LTGKTGDAAN LVIGAGINLQ MREPAPDTIS QGWINLQEAG IDINRNTLAS 
TLISELRGAL AIFELQGLEP FIPRWEKLDN YFNRPVRLII GNREIYGIDR GIDRQGALLL 
ENDGLVTPYI GGEISLRGA