Gene PC1_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0191 
Symbol 
ID8131091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp219699 
End bp220802 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content55% 
IMG OID644863459 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_003015787 
Protein GI253686597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.142566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCAG AAATCCTGCC CATCGAACAA TACGACGACC AGCTTGCAGA GAAAACCGAG 
CGTCTGCGTG GAATGATGGC GCCTTTCAAT GCACCGGAAC CTGTCGTCTT CCGTTCTCCC 
GTCAGTCACT ATCGGATGCG CGCCGAATTC CGTATCTGGC ACGAGGGTGA CGAGCTTTAC 
CACATCATGT TTGACCAGCA AACCAAACAG CGCATTCGGG TCGATCGCTT TCCGGCAGCC 
AGTGAGTTAA TCAACCGCCT GATGCCGGAG CTGCTTGCAG CGATCCAGCC CGATTCCGTC 
CTGCGCCGCA AGCTGTTCCA GATAGACTAT CTGTCCACTC TGAGCGGGGA AGTGATCGTT 
TCGCTGTTGT ATCACCGTGC TCTGGACGAG GAATGGCAGG AACACGCCCG TGCGCTGCGC 
GATAGCCTGA CGGCGCAGGG GTTCCGCCTA CAACTGATTG GCCGCGCGAC AAAAACCAAA 
ATCTGTCTCG ATCGCGATTA TGTCGATGAA TGCCTGCCGG TTGCAGGTCG GGATATGATT 
TACCGACAGG TAGAAAACAG CTTCACGCAG CCGAATGCCG CAATCAATAT TCAGATGCTG 
GAATGGGCGC TGGATGCGAC GGCGGGATCG ACGGGAGATT TGCTGGAGCT GTATTGCGGC 
AATGGCAATT TTTCACTCGC GCTGGCAAGG AATTTCGAAC GCGTACTAGC GACCGAGATC 
GCCAAGCCAT CCGTCGCGGC AGCACAGTAT AATATCGCGG CGAACCAGAT AGAGAACGTG 
CAGATTATCC GCATGGCGGC CGAAGAATTT ACGCAGGCCA TGCAGGGTGT ACGTCAGTTT 
AACCGCTTAC AGGGCATCGA CCTGACAAGC TACCAGTGCG AGACCATTTT TGTTGACCCG 
CCGCGCAGCG GGTTGGATGA CGAAACGGTG AAACTGGTGC AGGCGTATCC GCGCATTCTT 
TATATTTCCT GCAACCCAGA AACGCTGAGC CATAACCTGC AAACGCTCTC AGAAACCCAC 
GACATTCGCC GTCTGGCACT GTTCGACCAA TTTCCTTACA CCCACCATAT GGAGTGTGGC 
GTGCTGTTGG AAAAACGTCA GTAA
 
Protein sequence
MTPEILPIEQ YDDQLAEKTE RLRGMMAPFN APEPVVFRSP VSHYRMRAEF RIWHEGDELY 
HIMFDQQTKQ RIRVDRFPAA SELINRLMPE LLAAIQPDSV LRRKLFQIDY LSTLSGEVIV 
SLLYHRALDE EWQEHARALR DSLTAQGFRL QLIGRATKTK ICLDRDYVDE CLPVAGRDMI 
YRQVENSFTQ PNAAINIQML EWALDATAGS TGDLLELYCG NGNFSLALAR NFERVLATEI 
AKPSVAAAQY NIAANQIENV QIIRMAAEEF TQAMQGVRQF NRLQGIDLTS YQCETIFVDP 
PRSGLDDETV KLVQAYPRIL YISCNPETLS HNLQTLSETH DIRRLALFDQ FPYTHHMECG 
VLLEKRQ