| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0187 |
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| Symbol | |
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| ID | 8131087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 216089 |
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| End bp | 216997 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863455 |
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| Product | DNA-binding transcriptional regulator OxyR |
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| Protein accession | YP_003015783 |
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| Protein GI | 253686593 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTC GGGACTTAGA GTATCTTGTC GCGCTGGCAG AACATCGTCA CTTTCGGCGT
GCGGCAGATT CCTGCCATGT GAGTCAGCCA ACACTCAGTG GACAGATTCG TAAACTGGAA
GATGAACTCG GCGTGATGCT GTTGGAGCGA ACCAGTCGTA AGGTCTTGTT TACGCAAGCT
GGGCTGCTGC TGGTCGAGCA GGCACGAACG GTATTACGCG AGGTTAAGGT ACTTAAAGAG
ATGGCGAGCC AGCAGGGCGA AACCATGTCC GGGCCGCTAC ATATCGGCTT GATCCCCACG
GTGGGGCCTT ACCTGCTGCC GCAAATCATT CCAATGCTGC ATCGCACCTT TCCCAAGCTC
GAAATGTATC TGCACGAAGC GCAAACCCAT CAGTTGTTGG CCCAGTTGGA CAGCGGCAAA
CTGGACTGCG CCATTCTGGC GATGGTGAAA GAGTCCGAAG CCTTTATCGA AGTCCCCCTC
TTCGACGAGC CGATGAAGCT GGCTATTTAT CAGGATCACC CGTGGGCGAA TCGCGAGCGC
GTAGCAATGT CCGATCTGGC GGGTGAAAAA CTGCTGATGC TGGAAGACGG CCACTGCCTG
CGCGATCAGG CCATGGGCTT CTGTTTTCAG GCTGGAGCGG ACGAAGATAC GCATTTCCGG
GCAACCAGTC TGGAGACGCT GCGTAACATG GTCGCCGCTG GAAGTGGGAT TACGCTGCTG
CCGTCGTTAT CGGTTCCGCA TGAACGCGAA CGCGACGGCG TCTGCTATTT ACCGTGCTAT
AAACCGGAGC CCAAACGCAC GATTGCGCTG GTGTATCGCC CCGGTTCACC GCTGCGCGGA
CGCTATGAGC AGCTTGCTGA TACCATCCGC GAGCATATGC AGGGCTATAT GGAAAACCTG
TCAAAATAA
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| Protein sequence | MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA
GLLLVEQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPQII PMLHRTFPKL
EMYLHEAQTH QLLAQLDSGK LDCAILAMVK ESEAFIEVPL FDEPMKLAIY QDHPWANRER
VAMSDLAGEK LLMLEDGHCL RDQAMGFCFQ AGADEDTHFR ATSLETLRNM VAAGSGITLL
PSLSVPHERE RDGVCYLPCY KPEPKRTIAL VYRPGSPLRG RYEQLADTIR EHMQGYMENL
SK
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