Gene PC1_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0168 
Symbol 
ID8131068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp195887 
End bp196930 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content55% 
IMG OID644863437 
ProductDNA-binding transcriptional regulator CytR 
Protein accessionYP_003015765 
Protein GI253686575 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCAGA AGAAAGGCGT CACCACGGCG ACGATGAAAG ACGTGGCGGA TGAGGCGGGC 
GTTTCCACCG CCACCGTATC CAGAACGTTA ATGAATCCGG AGAAAGTCTC TGCGACCACC 
CGCAGGAAGG TCGAGCAGGC CGTCATCGCC GTTGGCTATT CGCCCCACGC GCTCAACAGG 
AACCTCAAGC GTAACGAATC ACGCACGATC CTGACGATCG TACCGGATAT CTGCGATCCC 
TATTTTTCCG AAATCTTTCG CGGGATCGAG GAAACCGCAG CCGAACACGG CTATCTGGTG 
CTGATTGGCG ACTGTGCTCA CCAACATCAG AAAGAAAAAA CCTTCGTTGA CCTGATTATT 
ACCAAACAGA TCGACGGCAT GTTGCTACTG GGTTCTAATC TGCCGTTTGA CGCAGGCCAG 
GAAGAGCAGC GTAATCTGCC ACCGATGGTG ATGGCGAATG AGTTTTCACC GGATCTGGCA 
CTGCCAACCG TGCATATCGA TAACCTGACC GCCGCCTTTG AAGCCGTACA TTATCTTTAT 
CAGGCAGGGC ATCAGCGCAT CGCCTGTATT GCCGGCCCGG AGCACATGCA CCTGAGTCAA 
TATCGCCTAC AGGGCTATAT TCAGGCCCTG CGGCGCAACG GGATTCTTAT CGATAACCAA 
TATATCTTTC GCGGTGATTT CACCTACGAA ACCGGAATAA ATGGCCTGAT TGCGCTGATG 
CAGCACCCAC AGCCGCCCAG CGCGGTCTTC TGTCATAGCG ACCTCATGGC GCTGGGCGTA 
CTGGCGCAGG CAAGAAAGAT GGGGCTGGAT ATCCCACGTG ACCTCTCCGT CATCGGTTTC 
GACGATATCG AACAGGCACA GTACTGCTGG CCCCCCTTGA CTTCTGTCGC CCAACCTCGT 
TATCAGATCG GACGCGAGGC AATGCTGCTA CTCTTAGAGC AGTTGCAAGG TAACACGGTA 
CAAAGCGGTT CCCGTCTGTT GTCCAGTGAA CTGGTCATAC GCGACAGCGT CGCTGCACCG 
AATTTCGCTC GTAACAGGCT TTAA
 
Protein sequence
MKQKKGVTTA TMKDVADEAG VSTATVSRTL MNPEKVSATT RRKVEQAVIA VGYSPHALNR 
NLKRNESRTI LTIVPDICDP YFSEIFRGIE ETAAEHGYLV LIGDCAHQHQ KEKTFVDLII 
TKQIDGMLLL GSNLPFDAGQ EEQRNLPPMV MANEFSPDLA LPTVHIDNLT AAFEAVHYLY 
QAGHQRIACI AGPEHMHLSQ YRLQGYIQAL RRNGILIDNQ YIFRGDFTYE TGINGLIALM 
QHPQPPSAVF CHSDLMALGV LAQARKMGLD IPRDLSVIGF DDIEQAQYCW PPLTSVAQPR 
YQIGREAMLL LLEQLQGNTV QSGSRLLSSE LVIRDSVAAP NFARNRL