Gene PC1_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0163 
Symbol 
ID8131063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp191160 
End bp191645 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content54% 
IMG OID644863432 
Productribonuclease activity regulator protein RraA 
Protein accessionYP_003015760 
Protein GI253686570 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy
[TIGR02998] regulator of ribonuclease activity A 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG ATACTTCCGA ACTGTGCGAT ATCTATCACG AAGAGGTGAA TGTTGTTGAG 
CCTCTGTTCT CTAACTTTGG CGGGCGTACT TCATTTGGTG GCAAAATCAC CACGGTGAAA 
TGTTTTGAGG ATAACGGCCT GCTTTTCGAT CTCCTTGAAG AGAACGGCCT CGGGCGCGTG 
CTGCTGGTCG ATGGCGGGGG CTCCGTGCGC CGCGCGTTGA TCAACGCGGA AATCGCCCGG 
TTGGCGACGC AAAACGAATG GGAAGGCATT GTCGTGTATG GCGCAGTGCG TCAGGTTGAC 
GACTTGGCTG AGTTGGATAT CGGTATTCAG GCGATGGCGG CCATTCCGGT CGGCGCAGGC 
AGCGAAGGCA TCGGCGAGAG CGACATTCGC GTCAACTTCG GTGGCGTAAC CTTCTTCTCC 
GGTGACCATT TGTATGCCGA TAACACCGGT ATTATTTTGG CGGAAGACCC GCTGGATATT 
GAATAA
 
Protein sequence
MKYDTSELCD IYHEEVNVVE PLFSNFGGRT SFGGKITTVK CFEDNGLLFD LLEENGLGRV 
LLVDGGGSVR RALINAEIAR LATQNEWEGI VVYGAVRQVD DLAELDIGIQ AMAAIPVGAG 
SEGIGESDIR VNFGGVTFFS GDHLYADNTG IILAEDPLDI E