| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0160 |
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| Symbol | |
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| ID | 8131060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 189265 |
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| End bp | 190104 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863429 |
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| Product | MIP family channel protein |
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| Protein accession | YP_003015757 |
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| Protein GI | 253686567 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CAGAACGTTC AACGCTAAAA GGCCAGTGTA TCGCCGAGTT TCTCGGCACT
GGCCTGCTGA TTTTCTTCGG TGTCGGCTGC GTCGCCGCAT TGAAACTGGC GGGAGCCAGC
TTCGGACAGT GGGAGATCAG CATCATTTGG GGTCTGGGGG TTGCGATGGC AATCTACCTG
ACCGCCGCGA TTTCCGGTGC CCACCTCAAC CCAGCAGTAA CCATCGCGCT GTGGCTGTTT
GCCTGTTTCG ATGGGCGCAA AGTGGTGCCT TACATTCTGG CGCAGATTGC CGGCGCATTT
TGTGCCGCCG CACTGGTCTA CGGTCTTTAT CACAATCTGT TCGTGGATTT CGAGCAAACC
AACAACATGG TGCGCGGCAG TACGGAAAGC CTGAGTTTAG CCGGCATTTT CTCAACGTAT
CCAAACCCGC ACATTTCCGT CATGCAGGCG CTGCTGGTTG AAACCGTCAT CACCGCCATC
CTGATGTGTC TGATTCTGGC GCTGACCGAC GATGGTAACG GTATCCCACG CGGGCCACTC
GCCCCCCTGC TGATCGGTAT TCTGATTGCC GTCATCGGTG CATCTATGGG GCCGCTGACC
GGCTTCGCTC TCAACCCGGC GCGTGACTTT GGTCCTAAGC TGTTCGCCTT CCTGGCGGGT
TGGGGCAACG TCGCCTTTAC TGGCGCACGC GAAATCCCTT ACTTCCTGGT TCCTATCTTT
GGCCCCATCA TCGGTGCCTG TCTGGGTGCC TTCGGTTATC GCGCACTGAT TGGCCGTAAT
TTGCCATGCG ATGTGTGCGA ACCCGAGGCA GAAACTACCA CGCGTCGTGA AAGCCGTTAA
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| Protein sequence | MSQAERSTLK GQCIAEFLGT GLLIFFGVGC VAALKLAGAS FGQWEISIIW GLGVAMAIYL
TAAISGAHLN PAVTIALWLF ACFDGRKVVP YILAQIAGAF CAAALVYGLY HNLFVDFEQT
NNMVRGSTES LSLAGIFSTY PNPHISVMQA LLVETVITAI LMCLILALTD DGNGIPRGPL
APLLIGILIA VIGASMGPLT GFALNPARDF GPKLFAFLAG WGNVAFTGAR EIPYFLVPIF
GPIIGACLGA FGYRALIGRN LPCDVCEPEA ETTTRRESR
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