| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0157 |
|---|
| Symbol | |
|---|
| ID | 8131057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 185571 |
|---|
| End bp | 186317 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644863426 |
|---|
| Product | ferredoxin-NADP reductase |
|---|
| Protein accession | YP_003015754 |
|---|
| Protein GI | 253686564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT GGGTGACAGG CAAAGTGGTT CAGGTGGAAA ACTGGACAGA GAGTCTGTTT
AGCATTCGGG TTCACGCGCC CACCGATTCA TTCACTGCCG GGCAGTATGG CAAACTGGCG
CTGGAGATTG AGGGTGAGAA AGTGCAGCGC GCGTATTCCT ACGTGAATGC GCCCAGCGAT
CCTACACTTG AGTTCTATCT GGTGACAGTA CCGGAAGGCA AGCTTAGTCC TCATCTTCAT
GCGCTTCAGC CTGGTTCAGA AGTGATGGTC GTCAAAGAAC CCGCTGGATT TTTCGTGTTG
GAAGAGGTTC CTGACTGCGA GACGCTGTGG ATGCTGGCAA CAGGGACGGG TATTGGCCCT
TACCTGTCGA TCCTTCAGGA AGGTAAGGAT CTGGAGCGCT TTAAGAACAT CGTGCTGGTT
CACGCCGCCC GATTCTCACG CGATCTGAGC TATCTGCCGT TGATGCAGCA ATTACAGCAG
CGTTACCACG GGAAGCTGCG TATTCAAACG GTCGTCAGCC GGGAAGAGGA AACGGGCTCG
CTGACAGGCC GCGTTCCCCA GCTTATCAGC AACGGTACAT TGGAAGCCGC CGTGGGCTTG
CCGATGAATG CTGAAACCAG CCACGTTATG CTGTGCGGCA ACCCACAGAT GGTGCGCGAC
ACCCAGCTAT TGCTGAAAGA AGAGCGGCAA ATGACCAAGC ACCTGCGCCG CAGACCCGGT
CATATGACTG CCGAAAACTA TTGGTAA
|
|---|
| Protein sequence | MAEWVTGKVV QVENWTESLF SIRVHAPTDS FTAGQYGKLA LEIEGEKVQR AYSYVNAPSD
PTLEFYLVTV PEGKLSPHLH ALQPGSEVMV VKEPAGFFVL EEVPDCETLW MLATGTGIGP
YLSILQEGKD LERFKNIVLV HAARFSRDLS YLPLMQQLQQ RYHGKLRIQT VVSREEETGS
LTGRVPQLIS NGTLEAAVGL PMNAETSHVM LCGNPQMVRD TQLLLKEERQ MTKHLRRRPG
HMTAENYW
|
|---|
| |