| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0156 |
|---|
| Symbol | |
|---|
| ID | 8131056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 185131 |
|---|
| End bp | 185553 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644863425 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003015753 |
|---|
| Protein GI | 253686563 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAC AGCAATGGTG CTTCTCGTTT AAAGGCCGAA TCGGCCGTCG TGATTTCTGG
CTCTGGATGG CCATTTGGGT CGCACTGATG GCGGTACTGT TTACGCTATC CGGCCAAAGC
TGGCTGGATA CGCAATCAAC GGCGTTTGGT TTGGTGGTAT TGCTGTGGCC AACGGCGGCG
ATAATGGTGA AACGACTGCA CGACCGTAAT AAAAGCGGCT GGTGGGCGCT GCTGTTAGTG
GTGGCGTGGA TGCTGGCTTC GGGGAACTGG ACGATGTTTT CCACTATCTG GCAGTGGGGT
ATTGGCCGCT TCTTGCCGAT CCTGATTGTC GTGATGACGT TGCTCGATTG CGGCGTTTTC
CTGGGGACAA AAGGGGAAAA CCGGTTTGGA GCAGAGGCGG AGCCGTTTCG CTTCCGCCGC
TAA
|
|---|
| Protein sequence | MTLQQWCFSF KGRIGRRDFW LWMAIWVALM AVLFTLSGQS WLDTQSTAFG LVVLLWPTAA
IMVKRLHDRN KSGWWALLLV VAWMLASGNW TMFSTIWQWG IGRFLPILIV VMTLLDCGVF
LGTKGENRFG AEAEPFRFRR
|
|---|
| |