| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0154 |
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| Symbol | tpiA |
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| ID | 8131054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 183401 |
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| End bp | 184168 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863423 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003015751 |
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| Protein GI | 253686561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACATC CATTAGTTAT GGGTAACTGG AAGCTGAACG GCAGCACTCA CATGGTCAAC
GAACTGATCG CGGGCTTGCG TAAAGAGCTC AGCACCGTTG ACGGCTGTGG CGTAGCGATT
GCACCACCGG CGATCTACCT CGATCAAGCT AATCACCAAC TGGCTGGCAG CCGTATTGCA
CTGGGCGCGC AGAACGTTGA CGTAAACCTC TCTGGTGCCT TCACCGGTGA AACCTCTGCC
GACATGCTGA AAGACATCGG CGCGAAATAC ATCATCATCG GCCACTCCGA GCGCCGCACC
TACCACAAAG AAAGCGACGA ATTCATTGCG AAGAAATTTG GCGTGCTGAA AGACGCGGGC
CTGATTCCGG TGCTGTGCAT TGGCGAGACC GAAGCGGAAA ACGAAGCAGG CCAGACGGAA
GCGGTATGTG CACGTCAGTT GGATGCCGTG CTGAACACGC TGGGCGCGAA AGCGTTTGAA
AACACCGTTA TCGCCTACGA ACCTGTATGG GCTATCGGTA CCGGTAAATC TGCGACCCCT
GCGCAGGCGC AGGCCGTTCA CAAATTCATC CGCGATCACA TCGCCAAGCA AGATGCCGCG
GTTGCTGAAC AAGTTATCAT CCAGTACGGC GGTTCGGTTA ATGCTGCGAA TGCCGCAGAG
CTGTTCACGC AGCCGGATAT CGACGGCGCG CTGGTTGGCG GAGCATCACT GAAAGCCGAC
GCCTTTGCCG TTATCGTGAA AGCCGCAGCC GACGCGAAAC GCGGCTAA
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| Protein sequence | MRHPLVMGNW KLNGSTHMVN ELIAGLRKEL STVDGCGVAI APPAIYLDQA NHQLAGSRIA
LGAQNVDVNL SGAFTGETSA DMLKDIGAKY IIIGHSERRT YHKESDEFIA KKFGVLKDAG
LIPVLCIGET EAENEAGQTE AVCARQLDAV LNTLGAKAFE NTVIAYEPVW AIGTGKSATP
AQAQAVHKFI RDHIAKQDAA VAEQVIIQYG GSVNAANAAE LFTQPDIDGA LVGGASLKAD
AFAVIVKAAA DAKRG
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