| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0153 |
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| Symbol | |
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| ID | 8131053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 182158 |
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| End bp | 183261 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644863422 |
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| Product | agmatine deiminase |
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| Protein accession | YP_003015750 |
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| Protein GI | 253686560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACAGC CAGCAACTCC TTCTCTCACG ACGCCGCATC AGGATGGTTT TGCGATGCCC
GCCGAATGGG CGCCGCATGA TGCCGTGTGG ATGATTTGGC CGTATCGCAC TGACAACTGG
CGCGAACAAG GCATTCCGGC GCAAAAAACG TTCGCGCGCG TGGCAGAAGC TATCGCTCAG
AATACGCCGG TTATCATGGG TGTGCCCGCA CGTTACATGG CGAATGCGCA ACAAGTGATG
CCGGTAAATG TCACGCTGGT GGAAATGGAA AGCGACGACG CCTGGATGCG TGACACCGGT
CCAACCATCG TGCTGAATCA GGCGGGTGAA CGTCGGGGTA TCGACTGGCA GTTCAATGCC
TGGGGCGGCG AACTTGGCGG TCTGTATGAA GACTGGCGTC AGGATGAGAA AGTCGCGGCA
CAGGTGCTGG ACTATCATCA GGCTGGGCGT TACGCCGCGC CGCTGATTCT GGAAGGCGGC
TCGATCCATG TCGATGGTGA AGGCACATTG CTGACCACAG CGGAATGCTT GCTCAATCCG
AACCGTAACC CGCATCTGAG TAAGGCAGAA ATCGAACAGC TGATGCGTGA TTACCTCAGC
ATCTCGACGA TTATCTGGCT GGAAGAGGGC GTATACAACG ACGAAACCGA CGGGCATATC
GATAACATGT GCTGCTTCGT ACGCCCCGGT GAAGTGGCGC TGCACTGGAC GGATGACGAA
AACGATCCGC AGTATGCCCG CTCCGTTGCG GCCTATGAGG TGCTGTCGGC CGCGCGGGAT
GCACAAGGGC GTGAGCTGAA AATCTGGAAG TTGCCAGCCC CCGGCCCGCT CTATGCGACC
AAAGAGGAAG CGCAGGGCGT GGACAGCGGC GATGCGGTTG AACGCCTTGC CGGTTCTCGT
CTGGCGGGTT CCTATGTGAA TTTCCTGATC AGCAACCAGC AGATCATTTT CCCGCTGCTG
GATGAAAAGA CGGATGACGT TGCCCGCGAC CTGCTGCAAC AGATGTTCCC CGGCTACCTG
ATTAGCGGCG TGCCTGCGCG GGAAATCCTG CTGGGCGGTG GAAATATTCA CTGCATTACG
CAGCAAATCC CTGCGGTGAA GTAA
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| Protein sequence | MSQPATPSLT TPHQDGFAMP AEWAPHDAVW MIWPYRTDNW REQGIPAQKT FARVAEAIAQ
NTPVIMGVPA RYMANAQQVM PVNVTLVEME SDDAWMRDTG PTIVLNQAGE RRGIDWQFNA
WGGELGGLYE DWRQDEKVAA QVLDYHQAGR YAAPLILEGG SIHVDGEGTL LTTAECLLNP
NRNPHLSKAE IEQLMRDYLS ISTIIWLEEG VYNDETDGHI DNMCCFVRPG EVALHWTDDE
NDPQYARSVA AYEVLSAARD AQGRELKIWK LPAPGPLYAT KEEAQGVDSG DAVERLAGSR
LAGSYVNFLI SNQQIIFPLL DEKTDDVARD LLQQMFPGYL ISGVPAREIL LGGGNIHCIT
QQIPAVK
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