| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0136 |
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| Symbol | |
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| ID | 8131036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 162349 |
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| End bp | 163047 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863406 |
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| Product | DNA-binding transcriptional regulator CpxR |
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| Protein accession | YP_003015734 |
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| Protein GI | 253686544 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA TTCTGCTGGT TGATGACGAT AGAGAGCTGA CATCTTTATT GAAAGAGTTG
CTCGAAATGG AAGGTTTTAA CGTCGTTGTC GCCTACGACG GCGAGCAGGC GTTACAGGTA
TTAGATAACA CCATTGACCT GTTATTACTG GATGTGATGA TGCCGAAGAA AAACGGTATC
GATACATTAA AAGAACTACG ACAGCAGCAT CAAACGCCGG TCATCATGTT GACCGCCCGC
GGCAGTGAAT TAGATCGCGT TCTTGGTCTG GAACTGGGTG CGGATGACTA TCTGCCGAAG
CCCTTTAACG ACAGAGAATT GGTGGCGCGC ATTCGCGCGA TTCTCCGCCG TTCCAATTGG
ACCGATCAAC AGCAAGCGGG CGATAACAGC GCGCCGACGC TGGAAGTCGA CGGCCTGCGT
CTGAACCCCG GACGTCAGGA AGCCAGCTTT GACGATATCG TACTGGATTT GACGGGCACC
GAATTCACGC TGCTCTATCT GCTGGCACAG CGGCTGGGAC AGGTGGTTTC ACGCGAACAT
TTAAGCCAGG AAGTGCTGGG GAAACGACTG ACGCCGTTTG ACCGTGCGAT CGATATGCAC
ATCTCGAACC TGCGTCGTAA ACTGCCAGAA CGCAAGGACG GTCTGCCCTG GTTTAAAACG
CTGCGTGGAC GAGGCTATTT GATGGTATCG GCTGCATGA
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| Protein sequence | MNKILLVDDD RELTSLLKEL LEMEGFNVVV AYDGEQALQV LDNTIDLLLL DVMMPKKNGI
DTLKELRQQH QTPVIMLTAR GSELDRVLGL ELGADDYLPK PFNDRELVAR IRAILRRSNW
TDQQQAGDNS APTLEVDGLR LNPGRQEASF DDIVLDLTGT EFTLLYLLAQ RLGQVVSREH
LSQEVLGKRL TPFDRAIDMH ISNLRRKLPE RKDGLPWFKT LRGRGYLMVS AA
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