| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0129 |
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| Symbol | ugpQ |
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| ID | 8131029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 155084 |
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| End bp | 155833 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644863399 |
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| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_003015727 |
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| Protein GI | 253686537 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACAA TCTGGCCTTA CCCGAACATT GTCGCCCATC GCGGCGGTGG TTCACTGGCA
CCGGAAAACA CGCTGGCGGC GATTGATGTT GGCGCGAGCC TCGGTCACAA GATGATCGAA
TTTGATGCCA AGCTGTCGCA GGACGGCCAG ATTTTCCTCC TGCACGACGA CACGCTTGAG
CGCACCAGCA ATGGCTGGGG CATTGCAGGA GAACTGCCGT GGGACAAGCT GGTTGGGCTG
GATGTCGGCG GCTGGTACGG TCATAAATTT GTTGGTGAAC GCCTGCCGCT GCTATCGGAA
GTGGCAAAAC GCTGCGTGCA GTACGGCATG GCGGCCAATA TCGAGATTAA ACCTACTACC
GGATATGAAA CCGAAACCGG GCGGGTGATT GCGCTGGCGG CGCGTCAGCT GTGGGCCGAT
CATCCGGTTG CACCGCTACT GTCATCGTTC TCCATCGATG CCCTGGAAGC CGCGCAGCAG
GCTGCACCGG AACTCCCGCG CGGGCTGTTG CTGGATGAAT GGGACGAGGA CTGGCTGACG
CTAACGCAGC GTCTGGGGTG TGTGTCGATC CATTTGAATC ACCAACTGTT GACGGCAGAA
CGTGTCGCGG AACTGAAAGC GGCGGGTTTA CGCATTCTGG TTTATACCGT TAACCAACCC
GATCGCGCGC AAACTTTGCT GGATTGGGGC GTTGACTGTA TCTGTACTGA CCGGATAGAT
TTAATTGGGG CAAGCTTCGC GACCGGCTGA
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| Protein sequence | METIWPYPNI VAHRGGGSLA PENTLAAIDV GASLGHKMIE FDAKLSQDGQ IFLLHDDTLE
RTSNGWGIAG ELPWDKLVGL DVGGWYGHKF VGERLPLLSE VAKRCVQYGM AANIEIKPTT
GYETETGRVI ALAARQLWAD HPVAPLLSSF SIDALEAAQQ AAPELPRGLL LDEWDEDWLT
LTQRLGCVSI HLNHQLLTAE RVAELKAAGL RILVYTVNQP DRAQTLLDWG VDCICTDRID
LIGASFATG
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