Gene PC1_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0120 
Symbol 
ID8131020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp148530 
End bp149225 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content39% 
IMG OID644863390 
Producthypothetical protein 
Protein accessionYP_003015718 
Protein GI253686528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTGC GTAGTGAGAT TATTGATGGC CGACAAGCCT CTGGTGTGAC ATATGGCTTG 
ATTTATACCG AGGTGCTAGG TTGGATTGAT TTAGGCCATG CGAAAGGGGA CGACATTAAG 
GATATTATTC AACAAATGTA TGTCGGAGAG AATACTGAAG ACGGAATGCC ATACTACGAT 
GTTACCTATA AACAAGGCAT GATTGGACTC AGAAGAAGTG TCACTATCAA CCGGTTTATT 
AAATGGCGGA TAAAAAAAGG AAGGTCTCTT CAAGAAAGAC ATAGCATTGC TCTTGCTATG 
ATGCTCACCG TAGCGAAACG GTTTGAATCT ATGCAGGCTT CTTTTCCATT CAATTTAGTT 
ACAGATAGTG GATTTAGTGG GGAAGATCTT GTTTCAGATT TATTAGGTTT CTACCGAGTG 
GTTTCTACTC CTAACCCTTT TTATTTATTA CGGCCAGTGA GTAAAGAAGA AGCATTAAAA 
CGATGGGATT TCTATGGTCC TATCGGAAAT TTTAAAAATA TAGGATTCCG ACCTATTTTA 
TTTCCGGATC CTGAGCTCAT GTCCTATGCC CAACCTCGGT TAGGATTTCT CCCGTCTTTT 
ATGCAAACAA TACAACCTTA TAATGACTTT GAGTCAGGAA ATGTAGGTAT TGCATCCTAC 
GATGGTACTG AACTCACAAC AAATTTCTTT AAATAA
 
Protein sequence
MSVRSEIIDG RQASGVTYGL IYTEVLGWID LGHAKGDDIK DIIQQMYVGE NTEDGMPYYD 
VTYKQGMIGL RRSVTINRFI KWRIKKGRSL QERHSIALAM MLTVAKRFES MQASFPFNLV 
TDSGFSGEDL VSDLLGFYRV VSTPNPFYLL RPVSKEEALK RWDFYGPIGN FKNIGFRPIL 
FPDPELMSYA QPRLGFLPSF MQTIQPYNDF ESGNVGIASY DGTELTTNFF K