Gene PC1_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0118 
Symbol 
ID8131018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp146405 
End bp147319 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID644863388 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_003015716 
Protein GI253686526 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTTCTGATTA TGCTGTCGCC GTTATCGGTC TGGGTTCCAT GGGTTTTGGC 
GCTGCGGCGT CCTGTATCAA CGCTGGCCTA ACGACATACG GCGTCGATAT CAACCCGCAG
GCGCTGGAAC GGTTACGTCA AGCGGGTGCG GCGCAGGCCG ACACACGTAT TGATGCCTTC
GCTGACAAGC TGGATGCCGT GGTGCTGCTG GTCGTAAACG CCGCACAGGT GAACGGCATT
TTGTTCGGTG AACCGCAGGT CGCCGCGAAA CTCAAGCCCG GCACCGTAGT CATGGTGTCT
TCCACGATCT CCGCGCAGGA TGCCAAAAAC ATTGAACAGC GTCTGGCTGA GCATCAGCTG
ATCATGCTGG ATGCACCGGT ATCCGGCGGG GCGGCAAAAG CTGCTGCAGG CGACATGACG
GTAATGGCAT CCGGTTCCGA TCTGGCTTTT GAGAAACTGA AGCCCGTGCT GGATGCCGTC
GCGGGCAAGG TCTACCGCAT CGGTGAAGAA ATCGGGCTGG GCGCAACGGT TAAAATTATT
CACCAGTTGC TGGCAGGCGT ACATATCGCT GCTGGCGCGG AAGCAATGGC GCTCGCCGCC
CGTGCCGATA TCCCGCTGGA TATCATGTAT GACGTGGTGA CCAACGCCGC CGGGAATTCC
TGGATGTTTG AAAACCGCAT GCGTCACGTT GTCGATGGCG ATTACACGCC AAAATCCGCC
GTTGATATTT TCGTGAAAGA TCTGGGGCTG GTCACCGATA CCGCCAAATC ACTCCATTTC
CCACTGCCGC TGGCCTCTAC CGCGTTCAAC ATGTTTACCG CCGCCAGCAA CGCCGGATTT
GGTAAAGAAG ACGACAGCGC GGTCATCAAG ATCTTTAACG GCATTACGCT ACCGGAAAAG
AAGGAGGCGC CATGA
 
Protein sequence
MKKTSDYAVA VIGLGSMGFG AAASCINAGL TTYGVDINPQ ALERLRQAGA AQADTRIDAF 
ADKLDAVVLL VVNAAQVNGI LFGEPQVAAK LKPGTVVMVS STISAQDAKN IEQRLAEHQL
IMLDAPVSGG AAKAAAGDMT VMASGSDLAF EKLKPVLDAV AGKVYRIGEE IGLGATVKII
HQLLAGVHIA AGAEAMALAA RADIPLDIMY DVVTNAAGNS WMFENRMRHV VDGDYTPKSA
VDIFVKDLGL VTDTAKSLHF PLPLASTAFN MFTAASNAGF GKEDDSAVIK IFNGITLPEK
KEAP