| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0109 |
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| Symbol | |
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| ID | 8131009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 132080 |
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| End bp | 133270 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863379 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_003015707 |
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| Protein GI | 253686517 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTG AAGGGTTGTT AGCGCACCGT ATCGCTCAGT TAAAAAGTTC CGCCATCCGT
GAACTGCTGA AACACAGCAA GATGGAAAAT ATTATCTCGC TGGCTGGCGG GATTCCGTCA
GATGCATTGT TTGATTTCGA AGGGTTAAGT CAGGCCACGC ACTTAGCGAT TACCGAACAG
CCGAAAACGG CATTCCAGTA TGGCTTGACC GAAGGCAGCG GCGTGCTGCG CGATCGCATT
GCTGAGCTGT GTGCCGTGCG CGGCGTAAAA ACGCGCGGTG ACGATATTGT GGTGACGGCG
GGTTCACAGC AGGCACTGGA CTTGATCATG CGCTCGATGG TCGATCCGGG CGACGTGTTC
GTCGTTGAAC GTCCGACGTA TCTGGCGGCG CTGCAAACGC TGGAACTGGC GCAGGCGCAG
GTGATGTCGG TGTCATCTGA CGCCAATGGT ATGGTTGTCG ATGAGCTGGA AGAGCTGCTG
AAGAAACAGC GCATCAAAGG CGTTTATATC GTTCCGAACT TTGGTAACCC GAGCGGTGTT
ACGCTGAGCT ATGAACGTCG CCTGCAATTG ATTCAACTGG CGGAGCGCTA CGGTTTTGTC
ATTATCGAAG ACGATCCCTA TGGCGAGCTG CGCTTCACCG AAGAGCGTAA CCCGACGCTG
TTCCAACTGG CGCAGGAGAA GCTGGGGAGC ACGGAATATG TGCTGTACAC CTCCACGTTC
TCGAAAGTGC TGGCACCGGG GCTGCGTCTC GGCTGGGCGA TTCTGCCGGA CTGGCTGTTG
CACAAAGTGG CGATTATCAA ACAGGCCGCT GACCTGCATG CCAGCGCGCT GTCGCAGACC
GTCGCGGAAT GCTATCTGGG ATTAGGACGT CTGGATTCGC AGATCGAGAA AATCCGCCAC
GCCTATAAGC ACAAAGGTGA ACTGCTGGCA CAGCTGGTCG AGAAGGAACT GGGTGATGTG
ATCACCTTCA ACCAACCGAA AGGCGGGATG TTCCTGTGGG CGAAGTTCCG CCAGAACGAT
TTCAACACGA CGGAATGGCT GAAGAAGACG CTGGATCAGG GCGTTGTTTT CGTGCCGGGT
GAATTCTTCT TCCCAGACAA TGTCGATTAC TCAACGCTGC GTCTGTCCTT TGCGACGGCA
ACGGATGAGC AAATGCATGA AGCGGTGGCG CGACTGCGTC GGGCGCTGTA A
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| Protein sequence | MAIEGLLAHR IAQLKSSAIR ELLKHSKMEN IISLAGGIPS DALFDFEGLS QATHLAITEQ
PKTAFQYGLT EGSGVLRDRI AELCAVRGVK TRGDDIVVTA GSQQALDLIM RSMVDPGDVF
VVERPTYLAA LQTLELAQAQ VMSVSSDANG MVVDELEELL KKQRIKGVYI VPNFGNPSGV
TLSYERRLQL IQLAERYGFV IIEDDPYGEL RFTEERNPTL FQLAQEKLGS TEYVLYTSTF
SKVLAPGLRL GWAILPDWLL HKVAIIKQAA DLHASALSQT VAECYLGLGR LDSQIEKIRH
AYKHKGELLA QLVEKELGDV ITFNQPKGGM FLWAKFRQND FNTTEWLKKT LDQGVVFVPG
EFFFPDNVDY STLRLSFATA TDEQMHEAVA RLRRAL
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