Gene PC1_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0107 
SymbollivG 
ID8131007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp130573 
End bp131343 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content57% 
IMG OID644863377 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_003015705 
Protein GI253686515 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC AGCCACTATT ATCAGTCAGA GGTCTGATGA TGCGTTTTGG CGGCCTGCTG 
GCGGTCAACA ACGTTGAAAT GGATATTCAT GCGGGCGAAA TTGTCTCGCT GATCGGCCCG
AACGGGGCGG GGAAAACCAC CGTCTTTAAC TGCCTGACCG GTTTTTATCG CCCAAGCGGC
GGCACCATCA TGCTGCGCGA TCGTCATCTG GAAGGGTTAC CCGGACAGGC TATTGCCCGT
ATGGGCGTGG TGCGCACATT CCAGCACGTT CGCCTGTTCC GTGAAATGAC GGTGATCGAG
AACTTGCTGG TCGCACAGCA TCAGCACCTG AAAAGCGGCG TGTTTGCCGG GCTGTTGAAA
ACGCCGGGCT TTCGTCGTGC GGAAGCCGAT GCGCAAGAGC GCGCCGCAGT GTGGCTGGAG
CGTATCGGCC TGTTGGATTT AGCGAACCGT CAGGCGGGGA ATCTGGCTTA CGGCCAGCAG
CGCCGTCTGG AGATTGCCCG TTGTATGGTG ACGCGGCCCG AGCTACTGAT GCTGGATGAG
CCTGCGGCCG GTCTGAACCC GAAAGAAACT GACGAGTTAA ATCAGCTGAT TGCGGAATTG
CGCGATAGCC ATCAGGTATC GGTGCTGTTG ATTGAACACG ATATGAAGCT GGTCATGGGG
ATTTCCGACC GGATTTATGT TGTCAATCAG GGCACGCCGC TGGCACAGGG TACTCCAGCT
GAAATTCGTA ACAACCCGGA TGTCATTCGT GCCTATCTGG GTGAAGGATA A
 
Protein sequence
MSAQPLLSVR GLMMRFGGLL AVNNVEMDIH AGEIVSLIGP NGAGKTTVFN CLTGFYRPSG 
GTIMLRDRHL EGLPGQAIAR MGVVRTFQHV RLFREMTVIE NLLVAQHQHL KSGVFAGLLK
TPGFRRAEAD AQERAAVWLE RIGLLDLANR QAGNLAYGQQ RRLEIARCMV TRPELLMLDE
PAAGLNPKET DELNQLIAEL RDSHQVSVLL IEHDMKLVMG ISDRIYVVNQ GTPLAQGTPA
EIRNNPDVIR AYLGEG