| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0105 |
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| Symbol | |
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| ID | 8131005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 128379 |
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| End bp | 129305 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863375 |
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| Product | branched-chain amino acid transporter permease subunit LivH |
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| Protein accession | YP_003015703 |
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| Protein GI | 253686513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC AGTTCCTTTA CTTTTTTCAG CAGATGTTCA ACGGCCTGAC GTTGGGCAGC
ACCTATGCGC TGATCGCCAT TGGCTACACC ATGGTTTACG GCATTATCGG CATGATTAAC
TTCGCACACG GCGAAGTGTA TATGATCGGT AGCTATGTCT CCTTTATTGT GATTGCGGCC
CTGATGATGA TGGGCATCGA TGCTGGCTGG CTGCTGATTG GCGCCGCCTT CATTGCCGCC
GTGGTCATTT CCAGCGCCTA CGGCTGGAGT ATCGAACGGG TGGCCTATCG ACCTGTTCGA
ACGTCAAAGC GCCTGATTGC GCTGATTTCT GCCATCGGGA TGTCAATTTT CCTGCAAAAC
TACGTCAGCC TGAATCAGGG CTCGCGTGAT GTTGCGCTGC CGAGTCTGGT GACTGGCCAG
TGGGTGCTGG GCGAAAGCAA TGGCTTTGCC GCAACCATTA GCTCCATGCA GCTGATCATC
TGGATTGTTA CGTTCCTCGC CATGCTGGCG CTGACGTTGT TTATTCGCTA TTCCCGTATG
GGACGCGCCT GCCGCGCTTG CGCGGAGGAC CTGAAAATGG CGAGCCTGCT GGGTATCAGC
ACCGATCGCG TCATTTCCCT GACCTTCGTT ATCGGCGCGC TGATGGCCGC CGTTGCTGGC
GTGCTGTTGG GGCAATTTTA CGGCGTTATC AACCCCTATA TTGGCTTTAT GGCTGGGATG
AAAGCCTTTA CCGCTGCGGT GCTGGGCGGA ATCGGCAGTA TTCCTGGCGC GATGATCGGT
GGGCTGATTC TGGGCGTAGC CGAAGCGCTG ACGTCCGCCT ACCTGAGCAC GGAATACAAA
GATGCGGTGT CGTTTGCCCT GCTGATTGTG GTGCTGCTGG TGATGCCTAC CGGTATTCTG
GGTCGCCCGG AGGTTGAGAA AGTATGA
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| Protein sequence | MSEQFLYFFQ QMFNGLTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFIVIAA
LMMMGIDAGW LLIGAAFIAA VVISSAYGWS IERVAYRPVR TSKRLIALIS AIGMSIFLQN
YVSLNQGSRD VALPSLVTGQ WVLGESNGFA ATISSMQLII WIVTFLAMLA LTLFIRYSRM
GRACRACAED LKMASLLGIS TDRVISLTFV IGALMAAVAG VLLGQFYGVI NPYIGFMAGM
KAFTAAVLGG IGSIPGAMIG GLILGVAEAL TSAYLSTEYK DAVSFALLIV VLLVMPTGIL
GRPEVEKV
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