| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0104 |
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| Symbol | |
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| ID | 8131004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 127111 |
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| End bp | 128223 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863374 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003015702 |
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| Protein GI | 253686512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA GTAAAGGTAA AGTATTGCTG ATGGGTTGTA TGGCTGCGGC GTTTAGCCAT
GCAGTCAGTG CTGCCGATAT TAAAGTTGCG GTGGTTGGCG CGATGTCTGG CCCGGTTGCC
CAATATGGCG ACATGGAATT CATTGGCGCG CGTCAGGCGA TTGCTGACAT CAACGCAAAA
GGCGGCGTAA ATGGTAACAA ACTGGTTGGC GTGGAATATG ATGACGCGTG TGACCCTAAG
CAGGCTGTTG CCGTAGCGAA CAAGGTCATT AATGACGGTA TCCGTTATGT GATTGGCCAT
CTGTGTTCCT CCTCTACGCA GCCTGCGTCT GATATTTATG AAGAAGAAGG CGTGATCATG
ATTACGCCTG CGGCAACCAA CGCCGACTTG ACCACGCGCG GCTACAAAAT GGTGCTGCGC
ACGACGGGTC TGGATTCCGA TCAGGGACCA ACCGCGGCGA AGTACATCGT TGAAACCATC
AAACCGCAGC GTATCGCCGT GGTGCATGAC AAACAGCAAT ATGGTGAAGG TCTGGCCCGC
TCTGTTCAGG ATAGCCTGAA AAAAGCCGGT GCGAATGTTG TGCTGTTTGA AGGTGTGACG
GCGGGTGACA AAGATTTCTC TACGCTGGTT GCGCGCCTGA AGAAAGAGAA CGTCGATTTC
GTGTATTTCG GCGGCTACTA CCCAGAAATG GGGCAGATTC TGCGCCAATC GCGTCAGGCT
GGCATGACGA CCAAGTTCAT GGGTCCGGAA GGCGTGGGTA ACTCCTCGCT GTCCAACATC
GCGGGCGATG CGTCTGAAGG GATGCTGGTC ACGCTGCCGA AGCGTTACGA TCAGGTTCCT
GCGAACCAAC CGATTGTGGA TGCGCTGAAA GCCAAGAAAC TGGACCCGAC GGGCCCGTTT
GTCTGGACGA CCTATGCCGC GCTGCAATCG TTGACCACCG CGATGACGCG TACGGGTAGC
GACGAGCCAG AAAAACTGGT GGCGGATCTG AAAGCGAAAT CCGTGGATAC CGTAATGGGG
CCATTAAGCT GGGATGCAAA AGGCGACCTG AAAGGGTTTG AATTTGGCGT ATTTGAGTGG
CACAAAGACG GTACTTCCAG CGCAGTGAAA TAA
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| Protein sequence | MKFSKGKVLL MGCMAAAFSH AVSAADIKVA VVGAMSGPVA QYGDMEFIGA RQAIADINAK
GGVNGNKLVG VEYDDACDPK QAVAVANKVI NDGIRYVIGH LCSSSTQPAS DIYEEEGVIM
ITPAATNADL TTRGYKMVLR TTGLDSDQGP TAAKYIVETI KPQRIAVVHD KQQYGEGLAR
SVQDSLKKAG ANVVLFEGVT AGDKDFSTLV ARLKKENVDF VYFGGYYPEM GQILRQSRQA
GMTTKFMGPE GVGNSSLSNI AGDASEGMLV TLPKRYDQVP ANQPIVDALK AKKLDPTGPF
VWTTYAALQS LTTAMTRTGS DEPEKLVADL KAKSVDTVMG PLSWDAKGDL KGFEFGVFEW
HKDGTSSAVK
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