Gene PC1_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0094 
Symbol 
ID8130994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp119130 
End bp119759 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content54% 
IMG OID644863364 
ProductYhhN family protein 
Protein accessionYP_003015692 
Protein GI253686502 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGGT CATTTATTGC TGTGCTTTTT TCTGGTTGGC TGTATGTGGA CGCCAGCTAC 
CGTGGTCCAA CGTGGCAACG TTGGTTATTC AAACCAGTCA CCATGCTACT GCTGCTGGCT 
TTGGCCTGGC AGACGCCGCT ACTTGGCGTG CCGGGCTATC TGATTGTGCT GGGGTTGCTG 
GCAACGCTGG TCGCAGATAC CCTGTTGCTG CTGCCGACTC AGCGTCTGCT TTACGCGTTT 
GGTGCCTATT TCCTCTCCCA TTTGCTGTAC ACCGTTAGCT TCTTTACCGG ACAAATCGCG 
CTCACCTTCT TCTGGCCGCT GGCATTAACG CTCGTCATTC TGGCTGCAAT CCTGATCGCC 
ATTATCTGGG GACGATTGGA CACACAGCGC TGGCCCGCCT GCGCATTCAT CATCATGACC 
ACGCTGATGG TCTGGATTGC TGGCGAGCGG TATTTTGCGC TGGGAACAAA CGCGAATTTC 
TCTCTGCTGA CGGGTACCGT ACTACTGTTT ATCGCCCACG CAGCCTGGTT GATTCACCAT 
TACCGTTTTC CGTTCCGCGC CCATCAGGCG ATTGTGGCAG CGGGCTATTT TGGCGGCCAT 
TTCCTGATTG TCCGTTCCCT CTATTTCTAA
 
Protein sequence
MLWSFIAVLF SGWLYVDASY RGPTWQRWLF KPVTMLLLLA LAWQTPLLGV PGYLIVLGLL 
ATLVADTLLL LPTQRLLYAF GAYFLSHLLY TVSFFTGQIA LTFFWPLALT LVILAAILIA 
IIWGRLDTQR WPACAFIIMT TLMVWIAGER YFALGTNANF SLLTGTVLLF IAHAAWLIHH 
YRFPFRAHQA IVAAGYFGGH FLIVRSLYF