Gene PC1_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0083 
Symbol 
ID8130983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp107472 
End bp108764 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content52% 
IMG OID644863353 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_003015681 
Protein GI253686491 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT CAATTTTTAA AAGTCTTTAT TTTCAGGTTC TTGCTGCCAT TACGATAGGG 
ATACTGTTGG GGCATTTCTA CCCTCAACTT GGCGAGCAAA TGAAGCCTCT GGGCGATGGG
TTTGTTAAAT TAATTAAAAT GATTATTGCG CCGGTTATCT TCTGTACGGT GGTTACCGGT
ATCGCAGGAA TGGAAAGCAT GAAGTCGGTC GGTCGTACTG GTGCGGTCGC CCTGCTGTAT
TTTGAAATTG TGAGTACGAT TGCGCTGATT ATCGGTCTGG TCGTGGTCAA CATCGTGCAG
CCTGGCGCGG GCATGAACAT CGATCCAAGT ACGCTTGATG CGTCTGCGGT GGCGGTTTAT
ACCCAACAGG CCTCGCAACA GGGTCTGATT CCGTTCCTGA TGGACGTGAT TCCGGCGAGT
GTGGTTGGCG CGTTTGCCAG CGGTAATATT TTGCAGGTTC TGTTGTTTGC CGTGATGTTC
GGCTTTGCGT TGCACCGCTT AGGGGCAAAA GGCAAAGTGA TTTTTGACGT GATCGACAGC
TTCTCCAAGG TCATTTTCGG CGTCATTAAC ATGATCATGA AACTGGCTCC GCTGGGTGCG
TTCGGTGCAA TGGCCTTCAC CATCGGTAAA TATGGTGTCG GTACGCTGGT GCAACTGGGG
CAGCTGATCG CCTGCTTCTA CATCACCTGT GTCCTGTTCA TCTTCCTGGT GTTGGGAAGT
ATTGCTAAAG CGACCGGCTT CAGTATCTTC AAATTCATTC GCTACATCCG TGAAGAACTG
CTGATCGTAC TGGGTACGTC CTCTTCTGAA TCCGTGCTGC CACGTATGCT GGAGAAGATG
GAGAAAGTGG GTTGTAAAAA GTCTGTCGTC GGTCTGGTCA TTCCTACCGG CTACTCGTTC
AACCTTGACG GTACCTCCAT CTACCTGACG ATGGCGGCGG TGTTTATCGC TCAGGCGACC
AACAGCCACA TGGATATCTG GCATCAGATT ACTCTGCTGG TGGTGCTGCT GCTGTCCTCT
AAAGGTGCAG CGGGCGTGAC GGGAAGCGGA TTCATCGTGC TGGCGGCAAC GCTGTCTGCC
GTGGGCCACC TGCCTGTTGC TGGTCTGGCG CTGATTCTGG GTATTGACCG CTTCATGTCA
GAAGCCCGTG CGCTGACTAA CCTGATTGGT AACGGTGTTG CGACTATCGT GGTAGCGAAA
TATTGCCGCG AACTGGATGA GAAGAAACTG GATGCTGAGC TGTCCGGTAC GAATAAAAGC
GACAACGCGG CCACGCCGAC GGCGCAGTCA TAA
 
Protein sequence
MKTSIFKSLY FQVLAAITIG ILLGHFYPQL GEQMKPLGDG FVKLIKMIIA PVIFCTVVTG 
IAGMESMKSV GRTGAVALLY FEIVSTIALI IGLVVVNIVQ PGAGMNIDPS TLDASAVAVY
TQQASQQGLI PFLMDVIPAS VVGAFASGNI LQVLLFAVMF GFALHRLGAK GKVIFDVIDS
FSKVIFGVIN MIMKLAPLGA FGAMAFTIGK YGVGTLVQLG QLIACFYITC VLFIFLVLGS
IAKATGFSIF KFIRYIREEL LIVLGTSSSE SVLPRMLEKM EKVGCKKSVV GLVIPTGYSF
NLDGTSIYLT MAAVFIAQAT NSHMDIWHQI TLLVVLLLSS KGAAGVTGSG FIVLAATLSA
VGHLPVAGLA LILGIDRFMS EARALTNLIG NGVATIVVAK YCRELDEKKL DAELSGTNKS
DNAATPTAQS