Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0083 |
Symbol | |
ID | 8130983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 107472 |
End bp | 108764 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863353 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_003015681 |
Protein GI | 253686491 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT CAATTTTTAA AAGTCTTTAT TTTCAGGTTC TTGCTGCCAT TACGATAGGG ATACTGTTGG GGCATTTCTA CCCTCAACTT GGCGAGCAAA TGAAGCCTCT GGGCGATGGG TTTGTTAAAT TAATTAAAAT GATTATTGCG CCGGTTATCT TCTGTACGGT GGTTACCGGT ATCGCAGGAA TGGAAAGCAT GAAGTCGGTC GGTCGTACTG GTGCGGTCGC CCTGCTGTAT TTTGAAATTG TGAGTACGAT TGCGCTGATT ATCGGTCTGG TCGTGGTCAA CATCGTGCAG CCTGGCGCGG GCATGAACAT CGATCCAAGT ACGCTTGATG CGTCTGCGGT GGCGGTTTAT ACCCAACAGG CCTCGCAACA GGGTCTGATT CCGTTCCTGA TGGACGTGAT TCCGGCGAGT GTGGTTGGCG CGTTTGCCAG CGGTAATATT TTGCAGGTTC TGTTGTTTGC CGTGATGTTC GGCTTTGCGT TGCACCGCTT AGGGGCAAAA GGCAAAGTGA TTTTTGACGT GATCGACAGC TTCTCCAAGG TCATTTTCGG CGTCATTAAC ATGATCATGA AACTGGCTCC GCTGGGTGCG TTCGGTGCAA TGGCCTTCAC CATCGGTAAA TATGGTGTCG GTACGCTGGT GCAACTGGGG CAGCTGATCG CCTGCTTCTA CATCACCTGT GTCCTGTTCA TCTTCCTGGT GTTGGGAAGT ATTGCTAAAG CGACCGGCTT CAGTATCTTC AAATTCATTC GCTACATCCG TGAAGAACTG CTGATCGTAC TGGGTACGTC CTCTTCTGAA TCCGTGCTGC CACGTATGCT GGAGAAGATG GAGAAAGTGG GTTGTAAAAA GTCTGTCGTC GGTCTGGTCA TTCCTACCGG CTACTCGTTC AACCTTGACG GTACCTCCAT CTACCTGACG ATGGCGGCGG TGTTTATCGC TCAGGCGACC AACAGCCACA TGGATATCTG GCATCAGATT ACTCTGCTGG TGGTGCTGCT GCTGTCCTCT AAAGGTGCAG CGGGCGTGAC GGGAAGCGGA TTCATCGTGC TGGCGGCAAC GCTGTCTGCC GTGGGCCACC TGCCTGTTGC TGGTCTGGCG CTGATTCTGG GTATTGACCG CTTCATGTCA GAAGCCCGTG CGCTGACTAA CCTGATTGGT AACGGTGTTG CGACTATCGT GGTAGCGAAA TATTGCCGCG AACTGGATGA GAAGAAACTG GATGCTGAGC TGTCCGGTAC GAATAAAAGC GACAACGCGG CCACGCCGAC GGCGCAGTCA TAA
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Protein sequence | MKTSIFKSLY FQVLAAITIG ILLGHFYPQL GEQMKPLGDG FVKLIKMIIA PVIFCTVVTG IAGMESMKSV GRTGAVALLY FEIVSTIALI IGLVVVNIVQ PGAGMNIDPS TLDASAVAVY TQQASQQGLI PFLMDVIPAS VVGAFASGNI LQVLLFAVMF GFALHRLGAK GKVIFDVIDS FSKVIFGVIN MIMKLAPLGA FGAMAFTIGK YGVGTLVQLG QLIACFYITC VLFIFLVLGS IAKATGFSIF KFIRYIREEL LIVLGTSSSE SVLPRMLEKM EKVGCKKSVV GLVIPTGYSF NLDGTSIYLT MAAVFIAQAT NSHMDIWHQI TLLVVLLLSS KGAAGVTGSG FIVLAATLSA VGHLPVAGLA LILGIDRFMS EARALTNLIG NGVATIVVAK YCRELDEKKL DAELSGTNKS DNAATPTAQS
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