Gene PC1_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0073 
Symbol 
ID8130973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp91166 
End bp94660 
Gene Length3495 bp 
Protein Length1164 aa 
Translation table11 
GC content59% 
IMG OID644863343 
Productcellulose synthase subunit BcsC 
Protein accessionYP_003015671 
Protein GI253686481 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAACA ACACCGTAAA CTGGCTGCGC TTCCTCCCGT TATTGCTGGT TGCTGCGCCG 
CAGGCATACA GTGCGGAAAT CGCATCGCCA GAGCAATTTT TGATGGAGCA GGTGCGTCTG
GGAGAAGCCA GCAACAAAGA CGACCTCGTG CGCCAATCGC TTTATCGACT GGAGCTTATC
GATCCAAACA ACCCCGAGGT TATCGCCGCC CGATTACGGT TGGCGCTGCG TCAAGGCGAT
CAGGCCCAGG CTCGCCAGCA ACTGGACAAG CTGAAGGCGG TGGCTCCCGA CTCTGCCACC
TACCGTCAGT CAGCCACTAC GCTGGCACTG ACGCAGGATG CCGCTCGCCA ACAATTACAG
CAGGCACGCT TGCTGTCTAC CGCCGGGCGC TATGCTGAAG CCAAAGTGCA GTACGATGCG
CTCTTTCACG GCGATCCGCC AACGCTTGAG CTCGCCGTAG AATATTGGCG TCTGGTTTCT
CGCTTACCCG ACCAGCAGCC TCTGGCGATT AAACAACTGG AGGCGTTAGA TCAGGTCTAC
CCGAATAATG TGCCGCTGCG CATGGTGCTG GCACGGCTGT TGTTCAGCCA GAACCGCAAT
GAGCAAGCCT ATCCCCTACT CAAACAGCTT TCTAACGACC CCGTCGGGCG TAGCCAGGCA
GCGTCGCTAT GGCTGGAAAT TATTGGCCGG ATGCTGGTCA CGCCACAAAG CGTGGCTGAA
CTAAACCGCT TTCTGACCGT GTTTGATGAA GGCGAACAGG CGGATACGGC ACGTAAAGAA
CTCAGCCGCC AGCAGGGAAT ATTAGCCGAC CCCGTTTATC AGGGGCGGCT GCGTGCACTG
GCGCAGATTG AAGATGGCGG CGGCAATAGC GCCACGCTTA GCGAGTTGAA TAAGGCACTG
GCGGCCACGC CAAACGATCC TGAACTCATC GGTGCCATTG GTCTGGTTTA CCTGCGCGCA
GGCGATCGGG CAAAAGCGCT GACACAGTTC CAGAAGGCAT TGCAGGCAGA TGTTAATCGC
CTGAACAGCG GCAAATGGGA AGGACTGATC CAAAGCACGC AATATTGGAC CACCATTGCG
GAAGGTGACA ACGCGCTGAA AGCTAACAAC CTATCGCTGG CACGGCAGAA ATATCAGCAG
GCACGCCAGA TGGATAATAC CAATGCTTAT GCGCTGATTG GTTTGGGCGA CGTGGCTGTT
GCCAGCAAAA ATGATGCTGC CGCCCAGCCG CTCTACCAGC AGGCTTTACA CCTTGAACCC
GGTAATGATA ACGCCCTACG CGGATTGGTT GGTATTTACC AGCGGCAGTC GCCGGAGAAA
GCACTCGCTT ACCTCAACAG CCTGCCGCGC AGCCAGCAGA ATACGATGCG GGAGACACTT
GCTGCCCTGC AACTCAATAT CCTGAAACAG CAGGCGGACC AGTTGTCGGA ACAGCAGCAG
TGGACGCAGG CCGAAGAAAA ATATCGTCAG GCCAGCCAGC AGGATCCGAA CGATATATGG
CTCGCTTATC ACTATGCCCA GACGCTGCGC CAGTTGGGAC AAACGCAGCA AGCGGACAGC
GTGGTACAAC GCGCAACTGC CGTGCCACCC ACCAGCGCCG AGAAGAACTA TGTTTACTCA
CTTTACCTGT CGTCTACCAA TCGTGATGAG CAAGCACTCG CTCACCTGAA CACGCTTCCC
ACTGCACAGT GGAGCGACGA CATGCGCGAA TTGTCCCAGC GCCTGACGAT TCAGACCACG
CTGGCGAAAG CGGAAGCGAT GCGCGATGCG GGTGACGAAC CTGCCGCTAT TGCGTTCCTG
CGCCAGCAAC CGGCTGACAC CCGTATCGAC CTGCTGCTGG CAGACTGGGC GCTGGCACGG
GGTGAATACG CGACAGCGCT GGCGGAGTAT CAACGTATTC GCACACGGGA GCCACAGAAC
CCCGACGCCC AGTTAGGTGA GATCGACGCG TTTATCGCGC AGGGTCGGCA AGATGATGCG
CGCCAGCGCC TGAACCAGCT CCCAACGCAG GCGGTGGATA CACTTAACAG CCAGCGGCGC
GTCGCCAACG CCTGGCAAGC GGTAGGCAAT CCGCAAAAAT CAGCGGCGCT TTTCCGCCAG
CTAAAAATCG ATGCGCAGAA AGAGCCGGTC GGCCAAACGC CTATCGATCA AACGACAGCG
CTGATCTATC GCGATGCGGC ACGCGTTGAA CAACAGCAGT CTCAACCAGA GCAGGCGCAG
CAGGACTATA AACAGGCGAT GGTCGCCAGC GGCATCGCTC CCACGCTACC GCAAAGCGAC
GATGACTACA CCCGGCTGAC ACGTAATAAA AGCAGCGATG ACTGGCTGCA ACGCAGCATC
CGCGCTGACG CAGCGGATCT GTATCGCAAG CAGGATATTA CCGTCACCCT CGATCACGAT
TATTCGAGTT CAAGCGGCAC CGGTGGGATT TCCGACCTGA GCGCCCATAA CACCCTGTTG
CAGGTGGATA TGCCGCTGTA CGACGGCCGC GCCTTCTTGC GCACGGATAC CGTACAGATG
AACGCAGGTT CCTTCTCGAC AGGCAGTAAC GGCGCGTACC GGGAAACCTT CGGCACCTGC
GCCACGCGGG ACTGCTTCGA CGGTAAATCA CAGAAAACCA CCGGCACCAG CGTTGCCGCA
GGCTGGAAAA ACGATCGCTG GTCAGCGGAT CTCGGCACCA CGCCGCTCGG CTTCGACGTA
GTGGATGTTG TCGGTGGCGC AAGCTACAGC GGCGACTGGC GACAAATCGG CTGGACGGCG
ACGGCCTCCC GCCGCCCAAT ATCCAGCTCA TTGCTGGCGT TCGGCGGCAC CAAAGACCCC
GGCACGGGCA TAACCTGGGG CGGCGTGCGA GCCACGGGCG TCAGTCTCGG GCTGAGCTAC
GATCGGGGCG AAGCGCACGG CGTCTGGAGT GATTTCAGCC TCCACCAGAT CACCGGTAAA
AATGTGGCCG ATAACGATCG CGCCCGTGCA ATGGCAGGTT ATTACTACAA GCTGATTAAC
GAGGATAACC GACGCGTCAC GGTCGGTCTG AACAGCATGT GGTGGCGCTA CCAGAAGGAT
CTCAGTGGCT ACTCGCTCGG TCAGGGCGGT TACTACAGCC CGCAGCAATA TTTCTCGCTA
GGCGTACCAG TGAACTACCG GCAGCGGACG GAAAACTGGT CGTGGGAACT CGGCGGATCG
CTGTCGTGGT CGCGTTCTTC TACCAAAGAC CAGCGCCGCT ATCCACTGAC CGGCCTGCTG
GGTAACGCTG CGCTCACCGA CAGAGACACC ATCGAGCAGG GTAGCAGCAG TTCCGGCTTC
GGCTATACGG CGCGAGCGCT TGTCGAACGC CGCCTCAGCT CACACTGGAC GCTGGGTGTC
GGTATCGACA TTCAGCAAGC GAAGGACTAC ACCCCAAGCC ACGGCCTCAT CTACCTGCGC
TACTCCGCCT CCGGCTGGCA GGGCGACCTC GACAGCCCAC CGCAGCCGCT TACGCCGTAC
GCGGATTTTA AATAA
 
Protein sequence
MHNNTVNWLR FLPLLLVAAP QAYSAEIASP EQFLMEQVRL GEASNKDDLV RQSLYRLELI 
DPNNPEVIAA RLRLALRQGD QAQARQQLDK LKAVAPDSAT YRQSATTLAL TQDAARQQLQ
QARLLSTAGR YAEAKVQYDA LFHGDPPTLE LAVEYWRLVS RLPDQQPLAI KQLEALDQVY
PNNVPLRMVL ARLLFSQNRN EQAYPLLKQL SNDPVGRSQA ASLWLEIIGR MLVTPQSVAE
LNRFLTVFDE GEQADTARKE LSRQQGILAD PVYQGRLRAL AQIEDGGGNS ATLSELNKAL
AATPNDPELI GAIGLVYLRA GDRAKALTQF QKALQADVNR LNSGKWEGLI QSTQYWTTIA
EGDNALKANN LSLARQKYQQ ARQMDNTNAY ALIGLGDVAV ASKNDAAAQP LYQQALHLEP
GNDNALRGLV GIYQRQSPEK ALAYLNSLPR SQQNTMRETL AALQLNILKQ QADQLSEQQQ
WTQAEEKYRQ ASQQDPNDIW LAYHYAQTLR QLGQTQQADS VVQRATAVPP TSAEKNYVYS
LYLSSTNRDE QALAHLNTLP TAQWSDDMRE LSQRLTIQTT LAKAEAMRDA GDEPAAIAFL
RQQPADTRID LLLADWALAR GEYATALAEY QRIRTREPQN PDAQLGEIDA FIAQGRQDDA
RQRLNQLPTQ AVDTLNSQRR VANAWQAVGN PQKSAALFRQ LKIDAQKEPV GQTPIDQTTA
LIYRDAARVE QQQSQPEQAQ QDYKQAMVAS GIAPTLPQSD DDYTRLTRNK SSDDWLQRSI
RADAADLYRK QDITVTLDHD YSSSSGTGGI SDLSAHNTLL QVDMPLYDGR AFLRTDTVQM
NAGSFSTGSN GAYRETFGTC ATRDCFDGKS QKTTGTSVAA GWKNDRWSAD LGTTPLGFDV
VDVVGGASYS GDWRQIGWTA TASRRPISSS LLAFGGTKDP GTGITWGGVR ATGVSLGLSY
DRGEAHGVWS DFSLHQITGK NVADNDRARA MAGYYYKLIN EDNRRVTVGL NSMWWRYQKD
LSGYSLGQGG YYSPQQYFSL GVPVNYRQRT ENWSWELGGS LSWSRSSTKD QRRYPLTGLL
GNAALTDRDT IEQGSSSSGF GYTARALVER RLSSHWTLGV GIDIQQAKDY TPSHGLIYLR
YSASGWQGDL DSPPQPLTPY ADFK