Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0061 |
Symbol | |
ID | 8130961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 72097 |
End bp | 73446 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644863331 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003015659 |
Protein GI | 253686469 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAAGA ATAATATAAC GCTAGACCCG CGTTCTTCGT TTGATACCCG TTCTTCAGCA CCGCCAGAGG GAATAATTCA ACGCAGTAGT CGCATTAAAC GTATTCAGAC TACGGCAATG ATTCTGCTAT TTTTTGCGGC GGTGATTAAT TATCTCGACC GAAGTTCTCT TTCGGTCGCT AACTTAACGA TTCGTCAGGA ATTGGGGCTA AGTGCAACAG AAATTGGTGC ATTGCTCTCC GTTTTCTCTC TTGCCTATGG GATTGCACAG CTCCCTTGTG GACCGTTGCT GGATCGTAAA GGCCCGCGCA TTATGCTAGG CCTTGGGATG TTTTTCTGGT CACTGTTTCA GGCACTGTCT GGCATGGTAC ACAGCTTCAC TCAGTTCGTA CTGGTCCGTA TTGGTATGGG GATTGGCGAA GCACCGATGA ACCCATGCGG CGTGAAGGTG ATCAACGACT GGTTTAACAT CAAAGAGCGC GGCCGCCCGA TGGGATTCTT TAATGCGGCT TCAACGATTG GTGTTGCAAT AAGCCCCCCC ATTCTGGCGG CGATGATGTT GGTCATGGGC TGGCGCGGTA TGTTCATTAC CATCGGCCTA TTTGGTATTT TACTCGCTAT CGGCTGGTAT ATGTTGTATC GCAACCGTGA GCAGATCGAA CTCACCGCTG ATGAGCAGGC TTACCTGAAC GCGGGCAGCG TGAACGCTCG TCGCGATCCG TTGAGTTTCA TTGAATGGCG CAGTCTGTTC CGTAACCGTA CGATGTGGGG CATGATGCTG GGCTTTAGCG GCATCAACTA TACCGCGTGG TTATATTTAG CCTGGCTGCC CGGTTATCTA CAAACGGCTT ATAATCTGGA TTTAAAAAGC ACGGGTCTGA TGGCCGCGAT TCCTTTCCTG TTTGGTGCCG CTGGGATGCT GGTGAACGGC TATGTCACGG ACTGGCTGGT GAAAAGGGGA ATGGAACCAA TCAAGAGCCG TAAAATCTGC ATCATTGCCG GTATGCTGTG CTCTGCGGCT TTTACCTTTG TTGTTCCACA GGCAACAACC TCAATAGAAG CGGTATTGCT GATTAGTATG GCGCTGTTCT GCATCCACTT TGCGGGAACA TCGTGCTGGG GGCTGATCCA TGTTGCCGTT GCGTCGCGTA TGACAGCATC GGTCGGCAGT ATCCAAAACT TTGCCAGCTT CATCTGTGCA TCATTCGCCC CGATTGTGAC CGGCTTTATT GTGGATACCA CGCATTCCTT CCGTCTGGCG CTGATCATCT GTGGTTGTGT GACGGTATTG GGTGCGCTGG CCTACGTCTT CCTCGTTCGT CAACCGATTA GCGATCCTCG TAAGGATTGA
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Protein sequence | MEKNNITLDP RSSFDTRSSA PPEGIIQRSS RIKRIQTTAM ILLFFAAVIN YLDRSSLSVA NLTIRQELGL SATEIGALLS VFSLAYGIAQ LPCGPLLDRK GPRIMLGLGM FFWSLFQALS GMVHSFTQFV LVRIGMGIGE APMNPCGVKV INDWFNIKER GRPMGFFNAA STIGVAISPP ILAAMMLVMG WRGMFITIGL FGILLAIGWY MLYRNREQIE LTADEQAYLN AGSVNARRDP LSFIEWRSLF RNRTMWGMML GFSGINYTAW LYLAWLPGYL QTAYNLDLKS TGLMAAIPFL FGAAGMLVNG YVTDWLVKRG MEPIKSRKIC IIAGMLCSAA FTFVVPQATT SIEAVLLISM ALFCIHFAGT SCWGLIHVAV ASRMTASVGS IQNFASFICA SFAPIVTGFI VDTTHSFRLA LIICGCVTVL GALAYVFLVR QPISDPRKD
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