Gene PC1_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0061 
Symbol 
ID8130961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp72097 
End bp73446 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content51% 
IMG OID644863331 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003015659 
Protein GI253686469 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAGA ATAATATAAC GCTAGACCCG CGTTCTTCGT TTGATACCCG TTCTTCAGCA 
CCGCCAGAGG GAATAATTCA ACGCAGTAGT CGCATTAAAC GTATTCAGAC TACGGCAATG
ATTCTGCTAT TTTTTGCGGC GGTGATTAAT TATCTCGACC GAAGTTCTCT TTCGGTCGCT
AACTTAACGA TTCGTCAGGA ATTGGGGCTA AGTGCAACAG AAATTGGTGC ATTGCTCTCC
GTTTTCTCTC TTGCCTATGG GATTGCACAG CTCCCTTGTG GACCGTTGCT GGATCGTAAA
GGCCCGCGCA TTATGCTAGG CCTTGGGATG TTTTTCTGGT CACTGTTTCA GGCACTGTCT
GGCATGGTAC ACAGCTTCAC TCAGTTCGTA CTGGTCCGTA TTGGTATGGG GATTGGCGAA
GCACCGATGA ACCCATGCGG CGTGAAGGTG ATCAACGACT GGTTTAACAT CAAAGAGCGC
GGCCGCCCGA TGGGATTCTT TAATGCGGCT TCAACGATTG GTGTTGCAAT AAGCCCCCCC
ATTCTGGCGG CGATGATGTT GGTCATGGGC TGGCGCGGTA TGTTCATTAC CATCGGCCTA
TTTGGTATTT TACTCGCTAT CGGCTGGTAT ATGTTGTATC GCAACCGTGA GCAGATCGAA
CTCACCGCTG ATGAGCAGGC TTACCTGAAC GCGGGCAGCG TGAACGCTCG TCGCGATCCG
TTGAGTTTCA TTGAATGGCG CAGTCTGTTC CGTAACCGTA CGATGTGGGG CATGATGCTG
GGCTTTAGCG GCATCAACTA TACCGCGTGG TTATATTTAG CCTGGCTGCC CGGTTATCTA
CAAACGGCTT ATAATCTGGA TTTAAAAAGC ACGGGTCTGA TGGCCGCGAT TCCTTTCCTG
TTTGGTGCCG CTGGGATGCT GGTGAACGGC TATGTCACGG ACTGGCTGGT GAAAAGGGGA
ATGGAACCAA TCAAGAGCCG TAAAATCTGC ATCATTGCCG GTATGCTGTG CTCTGCGGCT
TTTACCTTTG TTGTTCCACA GGCAACAACC TCAATAGAAG CGGTATTGCT GATTAGTATG
GCGCTGTTCT GCATCCACTT TGCGGGAACA TCGTGCTGGG GGCTGATCCA TGTTGCCGTT
GCGTCGCGTA TGACAGCATC GGTCGGCAGT ATCCAAAACT TTGCCAGCTT CATCTGTGCA
TCATTCGCCC CGATTGTGAC CGGCTTTATT GTGGATACCA CGCATTCCTT CCGTCTGGCG
CTGATCATCT GTGGTTGTGT GACGGTATTG GGTGCGCTGG CCTACGTCTT CCTCGTTCGT
CAACCGATTA GCGATCCTCG TAAGGATTGA
 
Protein sequence
MEKNNITLDP RSSFDTRSSA PPEGIIQRSS RIKRIQTTAM ILLFFAAVIN YLDRSSLSVA 
NLTIRQELGL SATEIGALLS VFSLAYGIAQ LPCGPLLDRK GPRIMLGLGM FFWSLFQALS
GMVHSFTQFV LVRIGMGIGE APMNPCGVKV INDWFNIKER GRPMGFFNAA STIGVAISPP
ILAAMMLVMG WRGMFITIGL FGILLAIGWY MLYRNREQIE LTADEQAYLN AGSVNARRDP
LSFIEWRSLF RNRTMWGMML GFSGINYTAW LYLAWLPGYL QTAYNLDLKS TGLMAAIPFL
FGAAGMLVNG YVTDWLVKRG MEPIKSRKIC IIAGMLCSAA FTFVVPQATT SIEAVLLISM
ALFCIHFAGT SCWGLIHVAV ASRMTASVGS IQNFASFICA SFAPIVTGFI VDTTHSFRLA
LIICGCVTVL GALAYVFLVR QPISDPRKD