Gene PC1_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0056 
Symbol 
ID8130956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp65988 
End bp67196 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID644863326 
Producthypothetical protein 
Protein accessionYP_003015654 
Protein GI253686464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACTGGCTAT AGGCATTACA CTGGCGCTGA CATCATGGCA ACTATCGGCG 
CAGACGTTTG TGCTGACAGA TGCTGAAAGC AGTGTAGAAA AGGGAAACTG GCAAATTGGT 
AGTGATGCTT TGAAGATCAA AAATCAGCAT TTCAGCATTG AGCAAAAAGT CCTGCACGGC 
GGACGTCAGG AAGGCAGTAA AGTGATTACG ATTACCAGTC AGGATGGGCT GAAAATTGCT 
CTCAGCCCGA CGCGAGGGAT GAACTTACTG CATGTGACGG GGAAAAACAT CCGTTTGGGG 
TGGGATTCAC CGGTTGATGA GGTCGTAAAC CCGAACACCA TCAATCTGGA AAGCCGTAAC 
GGACTGGGCT GGCTGGAAGG TTTCAATGAG ATGATGGTGC GCTGTGGCTT CGAATGGACG 
GGGCACCCGG TCGTCAGCGA GGGCATGATC TATACCCTGC ATGGCCGTGC AGGCAACACA 
CCAGCTTCAA AAGTGGTGGT GGAAGTCAGC GATAGCGCAC CGCATACCAT TACGGTGCGG 
GGCCTGCTGA AAGAAAACAG CTTCAAGAAG TCGAATCTGG AAACCTGGAC CGAGCTGCGC 
TACGTTCCCG GCAGCGAGTC GTTTACCGTG CATGATGTGT TGACCAACAA AGCCGACTAC 
GCGCGCGACT ATCAGATTAT CTATCACAGT AATTTCGGCA CGCCGATTCT GGAGGACGGT 
GCGCGTTTCA TCGCGCCGGT GAAAGAGATT TCTCCGTTTA ATGACCACGC TAAAGCGGGT 
CTGGCAACCT GGCAAACCTA CAAAGGGCCG ACAAAAGATT TTGATGAGAT GGTGTTTAAC 
ATTACGCCGT ATACGGATGG GCAGGGCAAA ACGCTGGCGG CGCTGGTGAA CAAGGCGGGA 
GATAAGGGCG TGTCGATTGC TTTTGATACC CATCAACTGC CGCTGCTGAC GCTGTGGAAA 
AACACGGATA CGGAAAAACA GGGCTACGTC ACAGGGATCG AACCCGGTAC TAACTACGCC 
TACCCGGTTA CGATTGAACG TGAGCAAGGA CGGGTCAAAA AGCTTCAGCC TGGCCAGAGC 
ACGACGTTTG AGCTGACATA CAGCCTGCTG AGTAGCGCAG AAGCGGTACA GAAAACGGAG 
CAGAAAGTAA AAGCCATTCA GGGTGATAAC AAAACCACGC TGACAGAAAA ACCGATCGCC 
ATCGAGTAA
 
Protein sequence
MKKLLAIGIT LALTSWQLSA QTFVLTDAES SVEKGNWQIG SDALKIKNQH FSIEQKVLHG 
GRQEGSKVIT ITSQDGLKIA LSPTRGMNLL HVTGKNIRLG WDSPVDEVVN PNTINLESRN 
GLGWLEGFNE MMVRCGFEWT GHPVVSEGMI YTLHGRAGNT PASKVVVEVS DSAPHTITVR 
GLLKENSFKK SNLETWTELR YVPGSESFTV HDVLTNKADY ARDYQIIYHS NFGTPILEDG 
ARFIAPVKEI SPFNDHAKAG LATWQTYKGP TKDFDEMVFN ITPYTDGQGK TLAALVNKAG 
DKGVSIAFDT HQLPLLTLWK NTDTEKQGYV TGIEPGTNYA YPVTIEREQG RVKKLQPGQS 
TTFELTYSLL SSAEAVQKTE QKVKAIQGDN KTTLTEKPIA IE