Gene PC1_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0052 
Symbol 
ID8130952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp60909 
End bp61316 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content54% 
IMG OID644863322 
Producthypothetical protein 
Protein accessionYP_003015650 
Protein GI253686460 
COG category[S] Function unknown 
COG ID[COG5435] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAGA TGAATGAAGG GACACTGGCT ATCCCTGCCG ATTGGCGCGA CGAATCACTC 
CACGTTTTTG TTCTTCCGGG AGATGCCATC AATCTGGTTG TCAACCGCAC CCCGATTGAT
TTCGGTCTGA CGGCAGAAAC GGTTTATCAG CAGACACTGG CTCAATTTGC GGCACACCTG
AAAGGGTATG AAGAGCGTGG CGTTTGGACA TTGACGTTGG ATGGGCAACC CGCACACGGT
CTGGAATATA CCTGGCGGTC ACCGGAAGGC CCAATGCATC AGGTTGTCGT GATGCAGGTA
CGCGGTGAGT TATTACTGAC GTTTACCGTA ACCGTAGCAG GCGAGCTCAG TGCGGAGCAG
AAAACAGCAA TGCTGGCGGT GGTCGAGACC TTTAAAGCCG CCACCTGA
 
Protein sequence
MYQMNEGTLA IPADWRDESL HVFVLPGDAI NLVVNRTPID FGLTAETVYQ QTLAQFAAHL 
KGYEERGVWT LTLDGQPAHG LEYTWRSPEG PMHQVVVMQV RGELLLTFTV TVAGELSAEQ
KTAMLAVVET FKAAT