Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0044 |
Symbol | |
ID | 8130944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 49825 |
End bp | 51432 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863315 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003015643 |
Protein GI | 253686453 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT CCCTGGTTAA GTCAAGGGTG TTGAAGTTCG GTCTTGGCTT GCTCGCCATG TCCGTCGCTG CAGGCGTTCA GGCAAAAACG CTGGTTTACT GCTCAGAAGG CTCCCCGGAA GGTTTTAACC CACAGCTGTT CACATCTGGT ACGACGTTTG ATGCCAGCTC TATTCCTATT TATAACCGTC TGGTGGAATT TAAAGACGGC ACCACGGACA CCAGTCCTGG GCTGGCTGAA AAATGGGATA TTAGCGAAGA CGGCAAAACC TATACCTTCC ATCTGCGCAA AGGCGTGAAA TGGCAGGACA GCAAGGATTT CAAACCTTCC CGTGAATTCA ATGCCGATGA CGTGATTTTC TCTTTCATGC GTCAGCAGGA TGCCAACCAT CCGTACCATA AAGTGTCTGG CGGCAGCTAC GAATACTATC AGGGTATGGG CATGCCAGAG CTGGTCAGCA AAATCGAAAA AGTTGACGAC TACACGGTCC GCTTTGTGCT GAACCGTCCT GAAGCGCCGT TCCTGGCAAA CCTGGCGATG GACTTCGCTT CCATCCTGTC AGCAGAATAC GCGGATCAGA TGCTGAAAGC CGGTACACCG GAGAAAATTG ACCTGAACCC AATCGGTACG GGCCCGTTCC AGCTACAGCA GTACCAGAAA GATTCCCGCA TTTTGTACAA AGCTTTTGAA GGCTATTGGG GCAGCAAGCC GGGCGTTGAC CGTCTGGTCT TCTCCATCAC GCCAGATGCT TCCGTACGTT ACGCCAAGCT GCAAAAAGAT GAATGCCAGA TCATGCCGTA TCCAAATCCG GCCGATCTCG CGAAGATGAA AGAAGATAAG AACATCACGT TGATGGAACA GCCTGGCCTG AACGTTGGCT ATCTGGCTTA CAACGTTGAG AAAAAACCGC TGGATAACGT CAAGATTCGC CAGGCGCTGA ACTATGCGGT TAACAAGACT GCCATTATCG AAGCGGTCTA TCAGGGGGCC GGCCAAGCCG CAACTAACCT GATCCCGCCG ACCATGTGGG GCTACAACAA CGACGTTAAA GACTACAGCT ACGATCCTGA GAAAGCGAAA GCACTGCTGA AAGAAGCGGG TATGGCTGAC GGTTTCTCTA TCGACCTGTG GGCAATGCCG GTACAGCGTC CGTATAACCC GAACGCGCGT CGTATGGCGG AAATGATTCA GTCCGACTGG GCGAAAGTTG GCGTGAAAGC CAAGATCGTC ACCTACGAGT GGGGCGAGTA TCTGAAGCGT GCGAAAGACG GCGAGCACCA GACCGTGCTG ATGGGCTGGA CAGGCGACAA TGGGGATCCA GATAACTTCT TCGCGACCCT GTTCAGCTGC GATGCGGCTA AAAATGGTTC CAACTACTCC AAGTGGTGCT ACAAGCCGTT TGAAGATCTG ATCCAACCGG CGCGCGCCGT TTCCGATCAC GAAAAACGTA TTGAACTGTA CAAGCAGGCA CAGGTTGTGA TGCACGATCA GGCTCCGGCG CTGATTGTCG CGCACTCTAC CGTGTACGAA CCTGTACGTA AAAACGTGAA AGGCTATGTG GTTCAGCCGC GTGGTGTGCA TAGCTTCAAC AACGTGACGT TGGATTAA
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Protein sequence | MEKSLVKSRV LKFGLGLLAM SVAAGVQAKT LVYCSEGSPE GFNPQLFTSG TTFDASSIPI YNRLVEFKDG TTDTSPGLAE KWDISEDGKT YTFHLRKGVK WQDSKDFKPS REFNADDVIF SFMRQQDANH PYHKVSGGSY EYYQGMGMPE LVSKIEKVDD YTVRFVLNRP EAPFLANLAM DFASILSAEY ADQMLKAGTP EKIDLNPIGT GPFQLQQYQK DSRILYKAFE GYWGSKPGVD RLVFSITPDA SVRYAKLQKD ECQIMPYPNP ADLAKMKEDK NITLMEQPGL NVGYLAYNVE KKPLDNVKIR QALNYAVNKT AIIEAVYQGA GQAATNLIPP TMWGYNNDVK DYSYDPEKAK ALLKEAGMAD GFSIDLWAMP VQRPYNPNAR RMAEMIQSDW AKVGVKAKIV TYEWGEYLKR AKDGEHQTVL MGWTGDNGDP DNFFATLFSC DAAKNGSNYS KWCYKPFEDL IQPARAVSDH EKRIELYKQA QVVMHDQAPA LIVAHSTVYE PVRKNVKGYV VQPRGVHSFN NVTLD
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