| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0042 |
|---|
| Symbol | |
|---|
| ID | 8130942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 46614 |
|---|
| End bp | 47012 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644863313 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003015641 |
|---|
| Protein GI | 253686451 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA ATTCAGCGAC TGAGAGAAAG GAAACTGAGG CAGGTGAGCA GCGTTATAAC
GTTTATTTAC AAGGCTGTCC GGCGAGAATG GTGCTTGAAC GTTTGGCGGA TAAATGGGCG
TTGCTGATAG TCGGTTTGCT GAGAACAGGG CCGCTGAGAT TTAACCAATT GCGGCGGGAA
ATTGAAGGGG TATCGCAGAA AGCGCTGAGC CAAACGCTGA AGAAACTGGA GCGGGACGGT
CTGCTTTCCC GAAAGGCATT CCCGACGGTG CCGGTTACGG TGGAATATGC GCTGACCCCG
TTGGGTAAAA CCTTATCGGA AGCCGTTGAA CCGCTGGCCA GGTGGGCCGA GAAAAATATC
GAAGACGTTT TATTGGCGCA GTCGCACTAT GATCAATAA
|
|---|
| Protein sequence | MTKNSATERK ETEAGEQRYN VYLQGCPARM VLERLADKWA LLIVGLLRTG PLRFNQLRRE
IEGVSQKALS QTLKKLERDG LLSRKAFPTV PVTVEYALTP LGKTLSEAVE PLARWAEKNI
EDVLLAQSHY DQ
|
|---|
| |