| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0039 |
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| Symbol | |
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| ID | 8130939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 44714 |
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| End bp | 45436 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644863310 |
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| Product | DNA-binding transcriptional activator DcuR |
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| Protein accession | YP_003015638 |
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| Protein GI | 253686448 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATG TACTGATTGT TGATGACGAT GCCATGGTTG CAGAGCTTAA CAAATCTTAT
CTGAACCAGG TTTCTGGATT TAGCTGCTAT GCGACCGTCC CTACGTTGCA GCAGGCGCGA
AACCTGCTGA TGCAACCTGA CTCGGAAATC GATTTGGTAC TGCTGGACAT TTACATGCAG
CAGGATAATG GACTGGATCT GCTGCCGACT ATCCGTGAAT TCAGTGAGAA GACGGACGTC
ATCATCATCT CTTCTGCCAG TGACGTGTAT ACCATCAAAA AAGCGCTGCA CTATGGCGTT
GTTGACTACC TGATTAAGCC TTTCCAGTTC TCGCGTTTCG AGCAAGCACT GACCGCCTAT
CGCGAAGAGG CGAACTTGTT CAAGCACCGT GATTTTGTTG GGCAGTCGGA TATTGATAAC
CTGATTCGCC GCACCAGTAG TAGCACGGTC AGCGAACGTA AAAAATTGCC GAAAGGGCTG
ACCAGCCTGA CGCTGCGTAC CGTCTGCGAG TGGATTGAAG GCAATCAGGG CATAGAGTTC
TCTACCGAAA TGCTGGCAAA TGCGATCGGC ATTTCCCGCG TATCCTGCCG TAAATACCTG
ATCTATCTGT CTGACACTGG CATCCTGACC ACCAACATCC TGTATGGCTC GACCGGTCGA
CCGGTTTATC TGTATCGCCT GTTGCCGGAA AAACAGGACT CGCTGCGCCA GTACTGTGAA
TAA
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| Protein sequence | MINVLIVDDD AMVAELNKSY LNQVSGFSCY ATVPTLQQAR NLLMQPDSEI DLVLLDIYMQ
QDNGLDLLPT IREFSEKTDV IIISSASDVY TIKKALHYGV VDYLIKPFQF SRFEQALTAY
REEANLFKHR DFVGQSDIDN LIRRTSSSTV SERKKLPKGL TSLTLRTVCE WIEGNQGIEF
STEMLANAIG ISRVSCRKYL IYLSDTGILT TNILYGSTGR PVYLYRLLPE KQDSLRQYCE
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