| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0032 |
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| Symbol | |
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| ID | 8130932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 35934 |
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| End bp | 37238 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863303 |
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| Product | hypothetical protein |
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| Protein accession | YP_003015631 |
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| Protein GI | 253686441 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATA AGTGGGGTGA TGTCTTGTCT GTTGAAGTTC AACTAACGTT TAATGCTGCT
GGTCATCAAC TTACCAACAT TAATTGCTGG TCATGCGATG GGGATTGGCT GGTTTATGAC
ATAAGACCCT ATGGATCTTC ATTCACAGGG CTGACAATTG AGCGAGTACA CCTGACAAGC
CGGGAAACCG AGGTGATTTA TCGGGCGACA GCGGGCGCAC ATGTGGGCGT AGTGACCTGT
AGCCCGCAGG AGCCGCTACG CTATGTCTTT ATCCACGGGC CGGAAAATCC AGACGGCGAG
TGGCAGTATG ATTTTCACCA TCGCCGTGGA ACGATAGTGG CGGATTGCCA GCGCGATGAG
GCCATCACGC TCGATGCCTT CTCCATTACG TCGCCTTATC AGGCCGGTGC GCTGCGCGGT
GGTACGCACG TTCACGTCTT CAGCCCGGAT GCCAGCCGCC TGAGCTTTAC CTATAACGAC
CATGTGCTGC ATGAGCGCGA TCCTGCATTG AACTTGCGCA ATGTGGGTGT GGCGGTGCCG
CTACAGGCCG TCACCGTTGA GAAACGCCAT CCGCGTGAAT ATGACGGCAG CCACTATTGT
GTGTTGGTCA GCCAAACGAC GCCGCAGCCA CAGCCCGGCA GCGATGAAAT CAACCGAGCT
TATGAAGAAG GCTGGGTGGG AACGGTGGGC TATATCCGAC AGGACGGTTC GCGCCAGCGT
TGGGCGCTGG CGTTCATCGG CGATACGCGT GCGGCGGACG GGACAACGGT GCCGGAGATC
TTTATCGTCG ATTTGCCGGA CGCGCTGGAG GATTACGCCA AAGAGGGGGA TGCGCCTCTG
GCAGGAACGG CAACCTCAAT GCCTGCACCG CCAGCGGGTG TGCAGCAACG GCGTTTAACC
TTTACGCATT CGCGTCGTTA CCCTGGCCTG GTCAATCAGC CGCGCCACTG GCTGCGAGCT
TCGCCCGACG GTAGCGAGAT TGCTTTCCTG ATGCGCGATG AGGCGGGTGT GGTTCAGCTG
TGGACGATTT CCCCGAATGG CGGTGAGCCA AGGCAGGTAA CGCACACGGA ACACGGTGTA
CAGTCTGCCT TTAATTGGCA TCCGGATGGG CGTTCTCTGG CGTTTGTGTG TGACAACAGC
ATCATGCTGT GTGAGGCGAA AAGCGGTGAA CTTGTTCGGC TGACGGCGCG GACGGACAGC
GCCCCGAGTG CGGATGCTGT GGTTTTTTCC CCTGATGGGA AACACATTGC GTATATGCGG
GAGATTGACG GCTTTAATCA GCTTTTTGTT GTGACGAGCG CCTAA
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| Protein sequence | MLNKWGDVLS VEVQLTFNAA GHQLTNINCW SCDGDWLVYD IRPYGSSFTG LTIERVHLTS
RETEVIYRAT AGAHVGVVTC SPQEPLRYVF IHGPENPDGE WQYDFHHRRG TIVADCQRDE
AITLDAFSIT SPYQAGALRG GTHVHVFSPD ASRLSFTYND HVLHERDPAL NLRNVGVAVP
LQAVTVEKRH PREYDGSHYC VLVSQTTPQP QPGSDEINRA YEEGWVGTVG YIRQDGSRQR
WALAFIGDTR AADGTTVPEI FIVDLPDALE DYAKEGDAPL AGTATSMPAP PAGVQQRRLT
FTHSRRYPGL VNQPRHWLRA SPDGSEIAFL MRDEAGVVQL WTISPNGGEP RQVTHTEHGV
QSAFNWHPDG RSLAFVCDNS IMLCEAKSGE LVRLTARTDS APSADAVVFS PDGKHIAYMR
EIDGFNQLFV VTSA
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