| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0020 |
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| Symbol | |
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| ID | 8130920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 22901 |
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| End bp | 23809 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863291 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003015619 |
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| Protein GI | 253686429 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGGGA ATACCATACA CCAGCCCGCC GCCGTGCAAA AAGCCGTACA TCCGGTGATG
CGTGTGGTGA TGGCGCTGAT CAACGATCGG TTGGCGCTGT TTGGGCTGAT CATGCTGGCG
ATTTTCGTGC TGCTGGCGCT GCTTGCCCCG CTGCTGTCGC CGCAGAACCC TTACGATCTG
ATGCAGCTCG ATATTATGGA TGGCCGACTT GTACCGGGTT CCTCCAGTAT GTCGGGCATG
ACGTATTGGC TGGGAACGGA CGATCAGGGG CGCGACCTGT TCAGTGCCAT TCTGTACGGC
ACCCGCATCA GCCTGATGGT GGGATTCACC AGCGCGGTGT TTGCGCTGCT GATTGGCGCC
TCGCTGGGTC TGATCAGCGC CTACGTTGGC GGAAAAACGG ATGCGACAAT CATGCGCATC
GTCGATATCC AGCTCAGTTT CCCGCCCATC CTGATTGCGC TGATCCTGTT GGCGGTACTG
GGACAAGGGG TCGATAAGAT CATTATGGCG CTGGTGGTGA CCCAGTGGGC TTACTACGCG
CGGACGATTC GCGGTTCGGC ACTGGTGGAA CGTCGCCGTA GCTACGTGGA CGCGGCGCGC
AGCATGGCAC TGTCCAACCG CCGCATCCTG TTTCGCCATA TTTTACCCAA CTGTCTGGCA
CCGCTGATCG TGGTGGCAAC GATGCGCATC GCCTACGCCA TCATGCTGGA AGCCACGCTC
TCGTTTCTGG GGATCGGGCT GCCCGTGACG GAGCCGTCGC TGGGGCTGTT GATCTCGAAT
GGTTTTGAAT ACCTGATGTC GGGCGACTAT TGGATCAGCT TCTTTCCGGG GCTGACACTG
CTGCTGCTGA TTGTGGCGAT CAATCTGGTC GGGGATGCGC TGCGCGACAT CCTCAACCCA
CGGAACTAA
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| Protein sequence | MTGNTIHQPA AVQKAVHPVM RVVMALINDR LALFGLIMLA IFVLLALLAP LLSPQNPYDL
MQLDIMDGRL VPGSSSMSGM TYWLGTDDQG RDLFSAILYG TRISLMVGFT SAVFALLIGA
SLGLISAYVG GKTDATIMRI VDIQLSFPPI LIALILLAVL GQGVDKIIMA LVVTQWAYYA
RTIRGSALVE RRRSYVDAAR SMALSNRRIL FRHILPNCLA PLIVVATMRI AYAIMLEATL
SFLGIGLPVT EPSLGLLISN GFEYLMSGDY WISFFPGLTL LLLIVAINLV GDALRDILNP
RN
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