Gene PC1_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0018 
Symbol 
ID8130918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp20920 
End bp21927 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content55% 
IMG OID644863289 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_003015617 
Protein GI253686427 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAAG AACGCATTAT TATTGATACC GATCCCGGCG TTGACGATGC GATAGCCATC 
TGGCTGGCGT TGGCTTCGCC CGAGCTGGAC GTACTGGGGA TTACCGTTGT GGCAGGCAAT
GTGCCGCTTG CCGCCACGCT ATCGAATGCG TGCAACGTGG TGGGTGTGAC GGGCAGAACC
GATGTGCCCA TTTTTGCCGG TGCGTCTCGT CCACTGATCC GCGATCAGGT TTTCGGTAAA
TACGCTCATA TCGGCAAATT TTCTGCTGAT TGGGTGCCGG AGAGCACGCT GTCGCCGGAA
CAGGAACACG CCGTTGATTT TCTGGTACGG ATGACGCGTC AGGCGGCTGC CGATAATAAT
CCCATCACCA TTTGCGCACT TGGCCCACTG ACGAATCTGG CATTGGCGCT GTGCTTCCAC
CCTGATGTCG CGCGTGGCAT CAAACAGATT GTGTCCATGA GCTGTGCCTT TACCGCAATG
GGAAATCGCG TACCGTGGGC GGACTTTAAC GTCTATGCCG ATCCCCATGC GGCGGAAATC
GTGTTTTCTT CCGGTGTACC CATTGTCATC ATGCCGTTGG ATATGACCTT CCAGGCGCTG
ATTCAGACGG AACAGGTTGA TGACATCGAG CGTAGCGGCG GTGCGCCGGG TAAGGCGATG
GCAGCACTGC TGCGTATGTT TGACCGTAGC GAAGTGGATC GCTTTGGCCG TGAAGGTGGA
CCGATCCATG ATGCGACCGT CATTGCGTGG TTGCTGAAAC CGGAGTTATT CAAATCAAAA
CGCGCGCGCA TCGGAGTAGA AGTTGCCGGT AGAACGGCGG GTTACGCGTT TGCTGATTTT
TATCACAAAC TGGGTGAACC AGAGAATGCG CTGGTCATGC GGGAAATCGA CGAGCAAGGG
TTTCTCGGGC TGATTGCCGA GCGCCTGCGC CGCTATGGCT CTGAAGAAAT AGAGGGTTCT
GAAAAGAAAG ATAGCTCCGA AGCACTAAAC GGTTCCGGGG GGCGCTAA
 
Protein sequence
MVQERIIIDT DPGVDDAIAI WLALASPELD VLGITVVAGN VPLAATLSNA CNVVGVTGRT 
DVPIFAGASR PLIRDQVFGK YAHIGKFSAD WVPESTLSPE QEHAVDFLVR MTRQAAADNN
PITICALGPL TNLALALCFH PDVARGIKQI VSMSCAFTAM GNRVPWADFN VYADPHAAEI
VFSSGVPIVI MPLDMTFQAL IQTEQVDDIE RSGGAPGKAM AALLRMFDRS EVDRFGREGG
PIHDATVIAW LLKPELFKSK RARIGVEVAG RTAGYAFADF YHKLGEPENA LVMREIDEQG
FLGLIAERLR RYGSEEIEGS EKKDSSEALN GSGGR