Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0018 |
Symbol | |
ID | 8130918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 20920 |
End bp | 21927 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863289 |
Product | Inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_003015617 |
Protein GI | 253686427 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCAAG AACGCATTAT TATTGATACC GATCCCGGCG TTGACGATGC GATAGCCATC TGGCTGGCGT TGGCTTCGCC CGAGCTGGAC GTACTGGGGA TTACCGTTGT GGCAGGCAAT GTGCCGCTTG CCGCCACGCT ATCGAATGCG TGCAACGTGG TGGGTGTGAC GGGCAGAACC GATGTGCCCA TTTTTGCCGG TGCGTCTCGT CCACTGATCC GCGATCAGGT TTTCGGTAAA TACGCTCATA TCGGCAAATT TTCTGCTGAT TGGGTGCCGG AGAGCACGCT GTCGCCGGAA CAGGAACACG CCGTTGATTT TCTGGTACGG ATGACGCGTC AGGCGGCTGC CGATAATAAT CCCATCACCA TTTGCGCACT TGGCCCACTG ACGAATCTGG CATTGGCGCT GTGCTTCCAC CCTGATGTCG CGCGTGGCAT CAAACAGATT GTGTCCATGA GCTGTGCCTT TACCGCAATG GGAAATCGCG TACCGTGGGC GGACTTTAAC GTCTATGCCG ATCCCCATGC GGCGGAAATC GTGTTTTCTT CCGGTGTACC CATTGTCATC ATGCCGTTGG ATATGACCTT CCAGGCGCTG ATTCAGACGG AACAGGTTGA TGACATCGAG CGTAGCGGCG GTGCGCCGGG TAAGGCGATG GCAGCACTGC TGCGTATGTT TGACCGTAGC GAAGTGGATC GCTTTGGCCG TGAAGGTGGA CCGATCCATG ATGCGACCGT CATTGCGTGG TTGCTGAAAC CGGAGTTATT CAAATCAAAA CGCGCGCGCA TCGGAGTAGA AGTTGCCGGT AGAACGGCGG GTTACGCGTT TGCTGATTTT TATCACAAAC TGGGTGAACC AGAGAATGCG CTGGTCATGC GGGAAATCGA CGAGCAAGGG TTTCTCGGGC TGATTGCCGA GCGCCTGCGC CGCTATGGCT CTGAAGAAAT AGAGGGTTCT GAAAAGAAAG ATAGCTCCGA AGCACTAAAC GGTTCCGGGG GGCGCTAA
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Protein sequence | MVQERIIIDT DPGVDDAIAI WLALASPELD VLGITVVAGN VPLAATLSNA CNVVGVTGRT DVPIFAGASR PLIRDQVFGK YAHIGKFSAD WVPESTLSPE QEHAVDFLVR MTRQAAADNN PITICALGPL TNLALALCFH PDVARGIKQI VSMSCAFTAM GNRVPWADFN VYADPHAAEI VFSSGVPIVI MPLDMTFQAL IQTEQVDDIE RSGGAPGKAM AALLRMFDRS EVDRFGREGG PIHDATVIAW LLKPELFKSK RARIGVEVAG RTAGYAFADF YHKLGEPENA LVMREIDEQG FLGLIAERLR RYGSEEIEGS EKKDSSEALN GSGGR
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