Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0013 |
Symbol | |
ID | 8130913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 15358 |
End bp | 16173 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863284 |
Product | sugar phosphatase |
Protein accession | YP_003015612 |
Protein GI | 253686422 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAA AACTGATTGC TATTGATATG GACGGGACGT TGCTGACGCC CCAAAATCAA ATTTCACCTG CGGTAAAAGC CGCGATTGCC GCTGCCAGAG AGAAAGGCGT GCAGGTCGTG CTGGCTACCG GTCGTCCTTA CATCGGCGTT GAGCGCTATT TGATGGAGCT GGATTTGCAG CAGGAAGGCT GTTACTGCAT CACCAACAAC GGTGCGCTGG TGCAGCGTAC GGTCAACGGT GACTGTGTGG CGCAAACGGC GCTGAGCTTC GACGATTATC TCTATTTTGA AGCGCTGGCC TGCAAATTGG GCGTTCATTT CCACGCGTTG GACTTCAATT TCGTCTATAC CGCCAATAAA GACATCAGCC CTTACACCAT TCACGAATCC CACCTGACCG GAATGCCGTT GAAGTATCGC GCGGTTGAGG AAATGGATCG CAGCCTGACG TTCCCGAAAG TGATGATGAT TGATGAGCCA GAGATCTTGG ATCGCGCCAT CAGCCAGATT CCACCGGAAG CCTTTGAACG CTATACCATC ATGAAGAGCG CCGAATACTA TCTGGAAATT CTGGATAAGC GCGTCAACAA AGGTGAAGGC GTGAAGATGC TGGCAGAGCA CCTCGGTATT CCACGCGAAA GCGTCATGAC GCTAGGTGAC CAGCAGAACG ATCTGGCAAT GATTCGCTAT GCTGGTATCG GCGTCGCGAT GGGTAATGCC ATCGACGAAG TGAAAGAAGC CAGCCAGTTT GTCACCAAAA GCAACACGGA AGACGGCGTC GCCTACGCGA TCGAGAAATT TGTGCTGAAT GCCTGA
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Protein sequence | MSVKLIAIDM DGTLLTPQNQ ISPAVKAAIA AAREKGVQVV LATGRPYIGV ERYLMELDLQ QEGCYCITNN GALVQRTVNG DCVAQTALSF DDYLYFEALA CKLGVHFHAL DFNFVYTANK DISPYTIHES HLTGMPLKYR AVEEMDRSLT FPKVMMIDEP EILDRAISQI PPEAFERYTI MKSAEYYLEI LDKRVNKGEG VKMLAEHLGI PRESVMTLGD QQNDLAMIRY AGIGVAMGNA IDEVKEASQF VTKSNTEDGV AYAIEKFVLN A
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