Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0002 |
Symbol | |
ID | 8130902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1474 |
End bp | 2574 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863273 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_003015601 |
Protein GI | 253686411 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00514307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA TTGTTGAACG CGAACGTCTG TTAAAGCCAT TACAACAGGT CAGCAGCCCG CTGGGCGGCC GACCGACTTT ACCGATTCTG GGCAACCTGC TGATTCAGGT GACGGAAGAT GCACTGTCGC TGACCGGTAC CGATCTGGAA ATGGAGATGG TGGCGAAAGT GGCGCTGACG CAGCCGCATG AGCCGGGTGC CACGACTGTC CCTGCCCGCA AGCTGTTCGA TATTTGCCGG GGGCTGCCGG AAGGCGCGGA AATCACCATT ATGCTGGATG GCGATCGCAT GCTGGTGCGC TCTGGCCGCA GCCGTTTCTC GCTGTCTACG CTACCTGCGG CGGATTTCCC TAATCTGGAC GACTGGCAGA GCGACGTTGA ATTCTCGTTG CCGCAGGCGA CGATGAAGCG TTTGATCGAA GCGACGCAGT TTTCGATGGC GCATCAGGAC GTACGCTACT ACCTCAACGG TATGCTGTTT GAAACCGAAG GTGAAGAGCT ACGCACGGTC GCGACAGATG GTCACCGTCT GGCGGTCTGT TCCATGCCGG TTGGTCAATC TCTACCATCA CATTCGGTGA TCGTACCGCG TAAAGGCGTG ATGGAACTGG TGCGTCTGCT GGATGGCGGT GATACGCCGT TGCAGCTGCA GATCGGCAGC AACAATATTC GCGCGCATGT CGGCGACTTT ATTTTCACGT CGAAGCTGGT CGATGGGCGT TTCCCTGATT ATCGCCGCGT ATTGCCGAAA AACCCGGATA AAACGCTGGA AGCCAGTTGC GATCTGCTCA AGCAGGCCTT CTCCCGTGCG GCGATTTTAT CGAATGAAAA ATTCCGCGGT GTGCGTCTGC ACCTGATTCA GAATCAGCTC AAAATTACTG CCAATAACCC GGAGCAGGAA GAAGCGGAAG AGATTCTGGA TGTGCAGTAC GACGGCACCG AGATGGAAAT CGGCTTTAAC GTCAGTTACG TACTGGATGT GCTGAACGCG CTGAAGTGCG AAGGTGTACG TTTGTTGCTG ACCGATTCCG TTTCCAGCGT GCAGATCGAA GATAGCGCCA GCCGGGCGGC GGCCTATGTC GTTATGCCAA TGCGGTTGTA G
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Protein sequence | MKFIVERERL LKPLQQVSSP LGGRPTLPIL GNLLIQVTED ALSLTGTDLE MEMVAKVALT QPHEPGATTV PARKLFDICR GLPEGAEITI MLDGDRMLVR SGRSRFSLST LPAADFPNLD DWQSDVEFSL PQATMKRLIE ATQFSMAHQD VRYYLNGMLF ETEGEELRTV ATDGHRLAVC SMPVGQSLPS HSVIVPRKGV MELVRLLDGG DTPLQLQIGS NNIRAHVGDF IFTSKLVDGR FPDYRRVLPK NPDKTLEASC DLLKQAFSRA AILSNEKFRG VRLHLIQNQL KITANNPEQE EAEEILDVQY DGTEMEIGFN VSYVLDVLNA LKCEGVRLLL TDSVSSVQIE DSASRAAAYV VMPMRL
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