Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0001 |
Symbol | dnaA |
ID | 8135299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 72 |
End bp | 1469 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863272 |
Product | chromosomal replication initiation protein |
Protein accession | YP_003015600 |
Protein GI | 253686410 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00156244 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGTTTGC ATGATGAGTT ACCTGCCACA GAATTCAGTA TGTGGATACG CCCGTTGCAG GCGGAGCTGA GTGATAACAC TCTGGCGCTC TACGCCCCCA ATCGTTTTGT GCTGGATTGG GTTCGTGATA AATACTTAAA TAATATCAAT GTCCTGCTGA ATGATTTTTG TGGGATGGAT GCCCCTTTAC TGCGTTTTGA GGTGGGTAGT AAACCGCTGG TTCAGGCCAT CAGCCAGCCC GCGCAACCGC ATCATAAGCA GGTCAGTGCT GCGCCTCAGC AGCAGGTACG CTCAGCGCCA GTACGTCCAA GCTGGGATAA CTCACCCGCG CAGGCGGAGC ATACCTACCG TTCCAATGTG AACCCCAAAC ATACGTTTGA TAACTTCGTT GAGGGTAAAT CGAACCAGTT AGCACGTGCG GCGGCGCGTC AGGTGGCTGA TAATCCGGGT GGCGCCTATA ACCCGTTGTT TCTTTATGGC GGTACCGGCC TGGGTAAAAC GCACCTGTTG CACGCAGTGG GGAATGGCAT CATTGCCCGT AAACCCAACG CGAAGGTGGT CTACATGCAC TCCGAGCGTT TCGTGCAGGA TATGGTGAAA GCGTTGCAGA ACAATGCGAT TGAAGAATTC AAACGCTACT ACCGTTCTGT TGATGCGCTG CTGATCGATG ATATTCAATT CTTTGCTAAT AAAGAGCGTT CGCAGGAAGA GTTCTTCCAT ACCTTCAACG CGCTGCTGGA AGGCAACCAG CAAATCATTC TGACGTCTGA CCGCTACCCG AAAGAGATTA ACGGCGTGGA AGATCGTCTG AAATCCCGCT TCGGCTGGGG GTTAACGGTC GCAATTGAAC CGCCAGAGCT GGAAACCCGC GTGGCGATTC TGATGAAAAA GGCAGATGAA AATGACATTC GCCTGCCTGG TGAAGTTGCG TTCTTTATTG CCAAGCGCCT GCGTTCTAAC GTGCGTGAGC TGGAAGGCGC ACTGAACCGC GTCATCGCGA ACGCCAATTT TACCGGCCGC TCCATCACCA TCGATTTTGT GCGCGAGGCG CTGCGCGATT TGCTGGCGTT GCAGGAAAAA CTGGTTACTA TCGACAATAT TCAAAAGACC GTGGCGGAAT ACTATAAAAT CAAGGTAGCC GATCTACTGT CTAAACGTCG TTCCCGCTCG GTGGCGCGTC CGCGCCAGAT GGCGATGGCG TTGGCGAAAG AACTGACGAA TCACAGCCTG CCGGAAATTG GTGATGCTTT TGGCGGGCGT GACCATACGA CGGTGTTGCA TGCCTGCCGC AAGATTGAGC AGTTGCGTGA AGAAAGCCAC GACATCAAAG AAGATTTTTC CAATTTAATC AGAACTCTAT CGTCATAA
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Protein sequence | MSLSLWQQCL ARLHDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN VLLNDFCGMD APLLRFEVGS KPLVQAISQP AQPHHKQVSA APQQQVRSAP VRPSWDNSPA QAEHTYRSNV NPKHTFDNFV EGKSNQLARA AARQVADNPG GAYNPLFLYG GTGLGKTHLL HAVGNGIIAR KPNAKVVYMH SERFVQDMVK ALQNNAIEEF KRYYRSVDAL LIDDIQFFAN KERSQEEFFH TFNALLEGNQ QIILTSDRYP KEINGVEDRL KSRFGWGLTV AIEPPELETR VAILMKKADE NDIRLPGEVA FFIAKRLRSN VRELEGALNR VIANANFTGR SITIDFVREA LRDLLALQEK LVTIDNIQKT VAEYYKIKVA DLLSKRRSRS VARPRQMAMA LAKELTNHSL PEIGDAFGGR DHTTVLHACR KIEQLREESH DIKEDFSNLI RTLSS
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