Gene Dd1591_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_4234 
Symbol 
ID8120159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp4779241 
End bp4780329 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content49% 
IMG OID644854611 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_003006506 
Protein GI251791785 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAGTAATCAA CCCTCTCGAT TTGAATGGAT TTGCTTTTGT CGAGTTTGTT 
ACCGATACCC CAGAAACACT CTCAACATTA TTCGTTTCGC TGGGTTTTAC CTGTGTTGCA 
CACCATCGCC ACCGTGATAT TGCACTCTTT CGGCAGAACA ACATCAATTT CCTTGTCAAT 
AATACGACCA CCGGTTTTCC ACAGACCTTT TTACAGGAGC ATGGCGCCGG GGCCTGCGGC 
GTGGGTTTTT ATGTCAAAGA CGCACACCGG GCTTATGAGC GGGCGCTTCA GTCCGGCGCA 
AAACCAGTAG ATCAGACCGT CAATCCGGGT GAAATTCGGG TGCCGGCTAT CGAAGGCATT 
GGCGGTTCAA GAATCTATTT CATCGAAAAA TATCATACGG ATATCGATAT TTTTGATATC 
GACTTTTCAT TTATTCCCGG CGTAGAAAGA AATCCGCAGG GATTTGGGCT GCATACCATT 
GATCATCTGA CCAATAATGT CTATCAGGGA AGAATGGATT ACTGGTCTGA ATTCTATACC 
CGAATATTTA ATTTCCGGCA AATTCGTTAT TTTGATATTG CAGGGGAATA TACAGGGTTG 
CATTCCAAAG CGATGGAGGC CCCTGACGGT AAAATCCGTA TTCCGCTGAA TGAAGAAGCA 
GAGGGCAGCA ATGGGCAAAT TCAGGAATTT CTGCGCCGGT TTAATGGCGA AGGTATCCAG 
CATATCGCGA TGCAAACCGA CGATATTCTG ACCTCGATCG ATCAGTTACG TCAGGCGGGG 
TTACCGCTGA TGACAGCCCC CTCAGAGACG TATTACCGTA TGGTGGAAGA ACGCCTGCCT 
GGGCACGGCC GTGATACCGC CGCACTACGG GCACGCGGCA TTCTGATTGA CGGCAATACC 
CGTAACGGGC AGAAAAAACT CCTGCTGCAA ATTTTCTCGG AAACGATGAT CGGCCCGCTG 
TTTTTTGAGT TTATCGAGCG GGATGGGGAC GAAGGATTCG GCGAAGGCAA TTTCAAGGCG 
CTGTTTGAAT CCATGGAGCG CGACCAACTG GCTCGCGGGG AAATCAAAGT CACGACAGAA 
GCGGTCTAA
 
Protein sequence
MTELVINPLD LNGFAFVEFV TDTPETLSTL FVSLGFTCVA HHRHRDIALF RQNNINFLVN 
NTTTGFPQTF LQEHGAGACG VGFYVKDAHR AYERALQSGA KPVDQTVNPG EIRVPAIEGI 
GGSRIYFIEK YHTDIDIFDI DFSFIPGVER NPQGFGLHTI DHLTNNVYQG RMDYWSEFYT 
RIFNFRQIRY FDIAGEYTGL HSKAMEAPDG KIRIPLNEEA EGSNGQIQEF LRRFNGEGIQ 
HIAMQTDDIL TSIDQLRQAG LPLMTAPSET YYRMVEERLP GHGRDTAALR ARGILIDGNT 
RNGQKKLLLQ IFSETMIGPL FFEFIERDGD EGFGEGNFKA LFESMERDQL ARGEIKVTTE 
AV