| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4173 |
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| Symbol | rbsC |
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| ID | 8117623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 4714424 |
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| End bp | 4715392 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644854553 |
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| Product | ribose ABC transporter permease protein |
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| Protein accession | YP_003006448 |
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| Protein GI | 251791727 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00211847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCTC AAACTATCAC AGCAAAGCGC TGGCTCAGCA AAGAGTGGCT GATGGAGCAA
AAATCATTGA TCGCCCTGCT GATTCTTATC GCTGTGGTGT CTTCGATGAG TCCCAACTTT
TTTACCCTGA ACAACCTGTT CAATATCCTG CAGCAAACCT CAGTGAACGC CATTATGGCG
GTGGGAATGA CGCTGGTTAT CCTCACCTCC GGTATCGATT TGTCGGTCGG GTCGTTGCTG
GCGCTGACCG GCGCGGTAGC GGCGTCCATC GTCGGGCTTG AGATCAACGC TTTGGCGGCG
GTATTCGCCG CACTGGCGTT GGGAGCCGTC ATCGGCGCAG GGACCGGCAT CATCGTTGCC
AAAGGGCGGG TGCAAGCCTT TATTGCTACG CTGGTGATGA TGTTGCTGCT ACGTGGCGTG
ACCATGGTGT ATACCAACGG TAGCCCAATC AACACCGGTT TTTCCGATGC GGCGGATGCG
TTAGGTTGGT TCGGTATCGG GCGTCCTCTC GGCGTGCCTA CGCCAATCTG GATTATGGCC
GTGGTATTCC TGGCAACCTG GTACATGCTG CACCATACCC GTATCGGTCG CTATATCTAT
GCGCTGGGTG GTAATGAAGC GGCAACCCGC CTTTCGGGGA TCAGCGTCGA TAGAGTGAAA
ATCGTCGTTT ATTCGTTGTG CGGTTTGTTG TCGGCTCTGG CAGGCATTAT TGAAGTGGCT
CGTCTGTCTT CCGCGCAACC AACGGCGGGA ACGGGGTATG AACTGGATGC CATTGCGGCG
GTAGTGCTGG GTGGTACAAG TTTGTCGGGT GGTAAAGGAC GCGTGGTGGG AACGTTAATC
GGTGCCTTGA TTCTGGGCTT CCTGAATAAT GGGCTTAACC TGTTAGGTGT TTCTTCTTAC
TACCAGATGA TCGTCAAGGC GGTGGTTATT CTGCTGGCGG TTTTGGTAGA TAACAAAGGC
AGTAAATAA
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| Protein sequence | MSSQTITAKR WLSKEWLMEQ KSLIALLILI AVVSSMSPNF FTLNNLFNIL QQTSVNAIMA
VGMTLVILTS GIDLSVGSLL ALTGAVAASI VGLEINALAA VFAALALGAV IGAGTGIIVA
KGRVQAFIAT LVMMLLLRGV TMVYTNGSPI NTGFSDAADA LGWFGIGRPL GVPTPIWIMA
VVFLATWYML HHTRIGRYIY ALGGNEAATR LSGISVDRVK IVVYSLCGLL SALAGIIEVA
RLSSAQPTAG TGYELDAIAA VVLGGTSLSG GKGRVVGTLI GALILGFLNN GLNLLGVSSY
YQMIVKAVVI LLAVLVDNKG SK
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