| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4163 |
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| Symbol | engB |
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| ID | 8117609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 4698125 |
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| End bp | 4698769 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644854539 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_003006438 |
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| Protein GI | 251791717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00525738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCCAGC AATACAACTA TCATATGACT CATTTCGTCA CCAGCGCGCC GGATATTCGT
CATCTTCCTG CCGACAGCGG TATTGAAGTC GCTTTTGCCG GCCGTTCCAA TGCAGGTAAA
TCCAGCGCAC TCAACACGCT GACCAACCAG AAAAGCCTGG CACGTATTAG TAAAACGCCG
GGTCGAACCC AACTGATCAA CCTGTTCGAA GTAACCGATG GCGTACGTCT GGTTGATTTG
CCCGGCTACG GCTATGCCGA AGTGCCGGAA GAGATGAAAC GCAAATGGCA GCGAGCGCTT
GGTGAATACC TGCAAAAGCG TAACTGTCTG AAAGGGTTGG TTGTATTAAT GGATATTCGT
CATCCGCTCA AAGATCTGGA CCAGCAGATG CTGGAGTGGG CTGTTGATGT CGGGCTGCCT
GTACTGGTAC TACTGACCAA AGCGGACAAG CTGGCCCAGG GCGCCCGTAA ATCCCAGCTA
AACATGGTAC GGGAAGCAGT CTTGCCATTC ATGGGGGATA TTCAGGTTGA AACGTTTTCT
TCGCTGAAAA AAACCGGTGT AGATAAATTA CGTCAGAAAT TAGATAACTG GTTCAGTACA
TTACCGCCAG CAGATGAGCA ATCGCTCCCC GAATCAGAGC AGTAA
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| Protein sequence | MTQQYNYHMT HFVTSAPDIR HLPADSGIEV AFAGRSNAGK SSALNTLTNQ KSLARISKTP
GRTQLINLFE VTDGVRLVDL PGYGYAEVPE EMKRKWQRAL GEYLQKRNCL KGLVVLMDIR
HPLKDLDQQM LEWAVDVGLP VLVLLTKADK LAQGARKSQL NMVREAVLPF MGDIQVETFS
SLKKTGVDKL RQKLDNWFST LPPADEQSLP ESEQ
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